BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021953 (644 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 29 0.57 SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 25 7.1 SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 25 9.3 >SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosaccharomyces pombe|chr 2|||Manual Length = 507 Score = 29.1 bits (62), Expect = 0.57 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +2 Query: 407 EIEEVDEENFPKNDSQG--EEEPLSDKASAEEVASKGIKMREIFK 535 EI EVD+EN +N SQ ++ P D+ E + ++++E ++ Sbjct: 25 EITEVDDENVNENKSQEMIQDIPARDREEIENITRTFVELQENYR 69 >SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual Length = 408 Score = 25.4 bits (53), Expect = 7.1 Identities = 11/43 (25%), Positives = 20/43 (46%) Frame = +2 Query: 401 LFEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASKGIKMREI 529 +F DE+ ND + + AE +A KG++ +E+ Sbjct: 66 MFSDTSEDEKRTLPNDEAQKRRDFIENGDAERLAHKGLRNKEV 108 >SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|||Manual Length = 1369 Score = 25.0 bits (52), Expect = 9.3 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +2 Query: 401 LFEIEEVDEENFPKNDSQGEEEPLSDKASAEEVASK 508 L E+ + E PK D+ E+P+ D+ E++ SK Sbjct: 1190 LLEVNPISGETIPKFDASSFEDPVCDE-FFEDIWSK 1224 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,340,924 Number of Sequences: 5004 Number of extensions: 44489 Number of successful extensions: 127 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 127 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 289756512 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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