Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021953
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024186-1|ABC86248.1| 1167|Drosophila melanogaster SD10794p pro...    28   9.4  
AY060484-1|AAL25523.1|  404|Drosophila melanogaster SD09116p pro...    28   9.4  
AE014297-170|AAF52081.2|  404|Drosophila melanogaster CG31536-PC...    28   9.4  
AE014297-168|ABI31137.1| 1167|Drosophila melanogaster CG31536-PE...    28   9.4  

>BT024186-1|ABC86248.1| 1167|Drosophila melanogaster SD10794p
           protein.
          Length = 1167

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/55 (23%), Positives = 28/55 (50%)
 Frame = +2

Query: 2   RFRKKIYSQKKYT*SIRLKKYSSYRYILIITYVLQNVKKNYLKRTLTNHGKLKIT 166
           + RK  + +K++   +  + Y  Y+  +   +  +N  KN+ K+ + NHG  + T
Sbjct: 299 KIRKISFKRKRFLVKLHPEGYGYYKDTVEFFFEGRNECKNFWKKCVENHGFFRCT 353


>AY060484-1|AAL25523.1|  404|Drosophila melanogaster SD09116p
           protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/55 (23%), Positives = 28/55 (50%)
 Frame = +2

Query: 2   RFRKKIYSQKKYT*SIRLKKYSSYRYILIITYVLQNVKKNYLKRTLTNHGKLKIT 166
           + RK  + +K++   +  + Y  Y+  +   +  +N  KN+ K+ + NHG  + T
Sbjct: 299 KIRKISFKRKRFLVKLHPEGYGYYKDTVEFFFEGRNECKNFWKKCVENHGFFRCT 353


>AE014297-170|AAF52081.2|  404|Drosophila melanogaster CG31536-PC,
           isoform C protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/55 (23%), Positives = 28/55 (50%)
 Frame = +2

Query: 2   RFRKKIYSQKKYT*SIRLKKYSSYRYILIITYVLQNVKKNYLKRTLTNHGKLKIT 166
           + RK  + +K++   +  + Y  Y+  +   +  +N  KN+ K+ + NHG  + T
Sbjct: 299 KIRKISFKRKRFLVKLHPEGYGYYKDTVEFFFEGRNECKNFWKKCVENHGFFRCT 353


>AE014297-168|ABI31137.1| 1167|Drosophila melanogaster CG31536-PE,
           isoform E protein.
          Length = 1167

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/55 (23%), Positives = 28/55 (50%)
 Frame = +2

Query: 2   RFRKKIYSQKKYT*SIRLKKYSSYRYILIITYVLQNVKKNYLKRTLTNHGKLKIT 166
           + RK  + +K++   +  + Y  Y+  +   +  +N  KN+ K+ + NHG  + T
Sbjct: 299 KIRKISFKRKRFLVKLHPEGYGYYKDTVEFFFEGRNECKNFWKKCVENHGFFRCT 353


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,075,945
Number of Sequences: 53049
Number of extensions: 413639
Number of successful extensions: 1226
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)