Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021952
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118753-1|AAM50613.1|  415|Drosophila melanogaster GH08043p pro...    30   2.6  
AE014297-685|AAF54177.1|  415|Drosophila melanogaster CG3223-PA ...    30   2.6  
L31852-1|AAA21090.1|  962|Drosophila melanogaster bcop protein.        30   3.4  
AF145656-1|AAD38631.1|  964|Drosophila melanogaster BcDNA.GH0931...    29   6.0  
AE014298-2708|AAF48830.2|  964|Drosophila melanogaster CG6223-PA...    29   6.0  

>AY118753-1|AAM50613.1|  415|Drosophila melanogaster GH08043p
           protein.
          Length = 415

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 130 HKLENFGLENTVDSLRTEAEKRSNVP--SSSLXLIHHGKILKD 252
           H L N  L   V  L+    K  ++   +S L +IHHG++L+D
Sbjct: 16  HPLHNIDLTRDVAYLKAVVTKEMHLQFDASELEIIHHGRVLED 58


>AE014297-685|AAF54177.1|  415|Drosophila melanogaster CG3223-PA
           protein.
          Length = 415

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 130 HKLENFGLENTVDSLRTEAEKRSNVP--SSSLXLIHHGKILKD 252
           H L N  L   V  L+    K  ++   +S L +IHHG++L+D
Sbjct: 16  HPLHNIDLTRDVAYLKAVVTKEMHLQFDASELEIIHHGRVLED 58


>L31852-1|AAA21090.1|  962|Drosophila melanogaster bcop protein.
          Length = 962

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
 Frame = -1

Query: 633 DLTRFVRCL-NAMGNSGWAV----APRLIVCRLAPRAANNSTSCNIE 508
           D +RF+RC+ N + +S  AV    A  LI   LAP A   + SC IE
Sbjct: 239 DGSRFIRCIYNLLNSSSNAVRYESAGTLITLSLAPTAIKAAASCYIE 285


>AF145656-1|AAD38631.1|  964|Drosophila melanogaster BcDNA.GH09317
           protein.
          Length = 964

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = -1

Query: 627 TRFVRCL-NAMGNSGWAV----APRLIVCRLAPRAANNSTSCNIE 508
           +RF+RC+ N + +S  AV    A  LI   LAP A   + SC IE
Sbjct: 241 SRFIRCIYNLLNSSSNAVRYESAGTLITLSLAPTAIKAAASCYIE 285


>AE014298-2708|AAF48830.2|  964|Drosophila melanogaster CG6223-PA
           protein.
          Length = 964

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = -1

Query: 627 TRFVRCL-NAMGNSGWAV----APRLIVCRLAPRAANNSTSCNIE 508
           +RF+RC+ N + +S  AV    A  LI   LAP A   + SC IE
Sbjct: 241 SRFIRCIYNLLNSSSNAVRYESAGTLITLSLAPTAIKAAASCYIE 285


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,905,415
Number of Sequences: 53049
Number of extensions: 667717
Number of successful extensions: 1946
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1946
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)