Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021952
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77663-17|CAB54256.5| 500|Caenorhabditis elegans Hypothetical p... 31 0.58
AL021346-4|CAB54259.5| 500|Caenorhabditis elegans Hypothetical ... 31 0.58
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 30 1.8
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 30 1.8
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 29 2.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 2.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 2.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 2.4
Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical... 29 3.1
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z74029-1|CAA98431.1| 293|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z72511-6|CAA96659.2| 391|Caenorhabditis elegans Hypothetical pr... 28 7.2
U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases... 28 7.2
AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical ... 28 7.2
U80027-21|ABQ13061.1| 200|Caenorhabditis elegans Hypothetical p... 27 9.5
U80027-20|AAC48113.2| 400|Caenorhabditis elegans Hypothetical p... 27 9.5
AF047655-10|AAC04396.1| 335|Caenorhabditis elegans Hypothetical... 27 9.5
AC025726-15|ABA00156.1| 273|Caenorhabditis elegans Atg (autopha... 27 9.5
>Z77663-17|CAB54256.5| 500|Caenorhabditis elegans Hypothetical
protein F53F4.14 protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +1
Query: 193 RSNVPSSSLXLIHHGKILKDKQHF--KNVESSLVKW 294
R+N PS S ++H+GKI+++ F +N+ SLVK+
Sbjct: 126 RTNFPSDSFYVMHNGKIIENFNAFIDENMGQSLVKY 161
>AL021346-4|CAB54259.5| 500|Caenorhabditis elegans Hypothetical
protein F53F4.14 protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +1
Query: 193 RSNVPSSSLXLIHHGKILKDKQHF--KNVESSLVKW 294
R+N PS S ++H+GKI+++ F +N+ SLVK+
Sbjct: 126 RTNFPSDSFYVMHNGKIIENFNAFIDENMGQSLVKY 161
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 121 IERHKLENFGLENTVDSLRTEAEKRSNVPSSSLXLIHHGKILKDKQHFKNVESSLVK 291
IER KL + LE + LRTEA++ + V + SL + + ++ + F+ +SL+K
Sbjct: 742 IEREKLCSKQLEKEISQLRTEADEMNIVMTQSLEM-ENLQLRDATKKFETENASLLK 797
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 121 IERHKLENFGLENTVDSLRTEAEKRSNVPSSSLXLIHHGKILKDKQHFKNVESSLVK 291
IER KL + LE + LRTEA++ + V + SL + + ++ + F+ +SL+K
Sbjct: 776 IEREKLCSKQLEKEISQLRTEADEMNIVMTQSLEM-ENLQLRDATKKFETENASLLK 831
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical protein
H05G16.1 protein.
Length = 1111
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 357 ELQQLNASLRTLGCTPNAPGWTRAMQLLNDDSVMAEIIEQAPSLGEDCVALQYCT 521
+ Q + L C+P A G T + +LNDD + E + ++ SL ED L T
Sbjct: 945 QTQPVRFDLPPSPCSPTAGGSTPFISILNDD-LFDECVSESRSLHEDMDRLDKTT 998
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = -1
Query: 615 RCLNAMGNSGWAVAPRLIVCRLAPRAANNSTSCNIEELHN 496
+C++ + R+I C ++ ++ + SCN+E +HN
Sbjct: 4380 KCISTLQLKLEETGTRIITCEVSNSSSKVNASCNVERVHN 4419
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = -1
Query: 615 RCLNAMGNSGWAVAPRLIVCRLAPRAANNSTSCNIEELHN 496
+C++ + R+I C ++ ++ + SCN+E +HN
Sbjct: 4380 KCISTLQLKLEETGTRIITCEVSNSSSKVNASCNVERVHN 4419
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = -1
Query: 615 RCLNAMGNSGWAVAPRLIVCRLAPRAANNSTSCNIEELHN 496
+C++ + R+I C ++ ++ + SCN+E +HN
Sbjct: 4380 KCISTLQLKLEETGTRIITCEVSNSSSKVNASCNVERVHN 4419
>Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 542 LGANLQTMRRGATAHPELPIALRHLTNLVRSRSSTGST 655
L + + RR ++ P P + ++ +VRSRS TG++
Sbjct: 529 LSQSTKPSRRSSSIRPRSPTSTSQMSTIVRSRSPTGAS 566
>AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 542 LGANLQTMRRGATAHPELPIALRHLTNLVRSRSSTGST 655
L + + RR ++ P P + ++ +VRSRS TG++
Sbjct: 529 LSQSTKPSRRSSSIRPRSPTSTSQMSTIVRSRSPTGAS 566
>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical protein
C36B1.8b protein.
Length = 1052
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 566 RRGATAHPELPIALRHLTNLVRSRSSTGSTPGDT 667
R T P++PIA H V++ ++TG G++
Sbjct: 1010 RANGTYEPQIPIAYYHAQGTVQNSNNTGGVNGNS 1043
>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical protein
C36B1.8a protein.
Length = 1049
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 566 RRGATAHPELPIALRHLTNLVRSRSSTGSTPGDT 667
R T P++PIA H V++ ++TG G++
Sbjct: 1007 RANGTYEPQIPIAYYHAQGTVQNSNNTGGVNGNS 1040
>Z74029-1|CAA98431.1| 293|Caenorhabditis elegans Hypothetical
protein C45B11.3 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 503 SSSILHEVEL-LAALGANLQTMRRGATAHPELP 598
S I E+ L LA GAN+ + ATAHP+LP
Sbjct: 22 SRGIGKEIALKLAKDGANIVVAAKTATAHPKLP 54
>Z72511-6|CAA96659.2| 391|Caenorhabditis elegans Hypothetical
protein F55A11.5 protein.
Length = 391
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 299 MHHFTRLDSTFLKCCLSFKIFPW*INXN 216
M+H TRLD ++ C L ++I PW I N
Sbjct: 89 MNHRTRLDWMYMWCAL-YQINPWLITSN 115
>U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases,
short chain protein6 protein.
Length = 418
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 503 SSSILHEVEL-LAALGANLQTMRRGATAHPELP 598
S I E+ L LA GAN+ + ATAHP+LP
Sbjct: 18 SRGIGKEIALKLAKDGANIVVAAKTATAHPKLP 50
>AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical
protein F54D7.2 protein.
Length = 393
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 189 FSLSSKRIYCILESKIL*FVTFYWSRFHFYTQKYAW 82
FS+SS + C+L S + F T +W +++ +W
Sbjct: 159 FSISSVELLCVLISTQIVFFTTHWEKYNTGIMFLSW 194
>U80027-21|ABQ13061.1| 200|Caenorhabditis elegans Hypothetical
protein T28A11.2b protein.
Length = 200
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 351 DAELQQLNASLRTLGCTPNAPGWTRAMQLLND 446
D QL A LRTL C P P R ++L+ +
Sbjct: 66 DKSCTQLTACLRTLQCGPENPERKRKLKLIRN 97
>U80027-20|AAC48113.2| 400|Caenorhabditis elegans Hypothetical
protein T28A11.2a protein.
Length = 400
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 351 DAELQQLNASLRTLGCTPNAPGWTRAMQLLND 446
D QL A LRTL C P P R ++L+ +
Sbjct: 66 DKSCTQLTACLRTLQCGPENPERKRKLKLIRN 97
>AF047655-10|AAC04396.1| 335|Caenorhabditis elegans Hypothetical
protein C17B7.2 protein.
Length = 335
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 351 DAELQQLNASLRTLGCTPNAPGWTRAMQLLND 446
D QL A LRTL C P P R ++L+ +
Sbjct: 44 DKSCTQLTACLRTLQCGPENPERKRKLKLIRN 75
>AC025726-15|ABA00156.1| 273|Caenorhabditis elegans Atg (autophagy)
related protein5, isoform a protein.
Length = 273
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 529 VIGSSGCQSTNNEAGCHSPSRIAHSIETPH 618
V+ SS ST++++ H P I+H I+ PH
Sbjct: 218 VLSSSSSSSTDSQSE-HPPRLISHGIDIPH 246
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,119,026
Number of Sequences: 27780
Number of extensions: 334848
Number of successful extensions: 857
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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