Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021951
         (575 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.2  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   5.0  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   6.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.7  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 33  LNIFYSRY*TKIKSLSN 83
           LN+FY+ + + IKS+SN
Sbjct: 527 LNMFYNNFNSDIKSISN 543


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 33  LNIFYSRY*TKIKSLSN 83
           LN+FY+ + + IKS+SN
Sbjct: 527 LNMFYNNFNSDIKSISN 543


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 197 VFKNYCSQHEVTRHLIRLASDTIKYSKDFEWFALKIYK 84
           ++ N    +EVT     +   T+KY+ D  W    IYK
Sbjct: 122 LYNNADGNYEVTL----MTKATLKYTGDVSWKPPAIYK 155


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 345 RRQILEAERSEHDLEGRFPFDV 410
           RR +LE  R++  LE    FD+
Sbjct: 230 RRIVLEERRAQSHLEAHCYFDI 251


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 411 IKKLTATGLMGACVDEEYGGK 473
           I KLTA G++    D EY  +
Sbjct: 161 ITKLTAMGVLNNLHDPEYSAR 181


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 411 IKKLTATGLMGACVDEEYGGK 473
           I KLTA G++    D EY  +
Sbjct: 161 ITKLTAMGVLNNLHDPEYSAR 181


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 411 IKKLTATGLMGACVDEEYGGK 473
           I KLTA G++    D EY  +
Sbjct: 161 ITKLTAMGVLNNLHDPEYSAR 181


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 481 SRPLPPYSSSTQAP 440
           SRPL P +SST  P
Sbjct: 91  SRPLHPPASSTSLP 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,984
Number of Sequences: 438
Number of extensions: 3166
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)