Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021950X
         (543 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97675-2|CAA66265.1|  837|Homo sapiens plakophilin 2a protein.         30   6.0  
X97675-1|CAA66264.1|  881|Homo sapiens plakophilin 2b protein.         30   6.0  
BC126199-1|AAI26200.1|  837|Homo sapiens plakophilin 2 protein.        30   6.0  
BC094762-1|AAH94762.1|  837|Homo sapiens plakophilin 2 protein.        30   6.0  
BC044925-1|AAH44925.2|  830|Homo sapiens TLK2 protein protein.         30   6.0  
AF162667-1|AAF03095.1|  749|Homo sapiens tousled-like kinase 2 p...    29   8.0  
AB004884-1|BAA20561.1|  719|Homo sapiens PKU-alpha protein.            29   8.0  

>X97675-2|CAA66265.1|  837|Homo sapiens plakophilin 2a protein.
          Length = 837

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -1

Query: 198 AEYENGDEIYLNCQCFPISHEFSLNYKIVGLYYKNYY--SPNITTDQNK 58
           A+Y+  D+   NC C   +  + L  ++   Y +N Y  + NI TD NK
Sbjct: 551 ADYQPDDKATENCVCILHNLSYQLEAELPEKYSQNIYIQNRNIQTDNNK 599


>X97675-1|CAA66264.1|  881|Homo sapiens plakophilin 2b protein.
          Length = 881

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -1

Query: 198 AEYENGDEIYLNCQCFPISHEFSLNYKIVGLYYKNYY--SPNITTDQNK 58
           A+Y+  D+   NC C   +  + L  ++   Y +N Y  + NI TD NK
Sbjct: 595 ADYQPDDKATENCVCILHNLSYQLEAELPEKYSQNIYIQNRNIQTDNNK 643


>BC126199-1|AAI26200.1|  837|Homo sapiens plakophilin 2 protein.
          Length = 837

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -1

Query: 198 AEYENGDEIYLNCQCFPISHEFSLNYKIVGLYYKNYY--SPNITTDQNK 58
           A+Y+  D+   NC C   +  + L  ++   Y +N Y  + NI TD NK
Sbjct: 551 ADYQPDDKATENCVCILHNLSYQLEAELPEKYSQNIYIQNRNIQTDNNK 599


>BC094762-1|AAH94762.1|  837|Homo sapiens plakophilin 2 protein.
          Length = 837

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -1

Query: 198 AEYENGDEIYLNCQCFPISHEFSLNYKIVGLYYKNYY--SPNITTDQNK 58
           A+Y+  D+   NC C   +  + L  ++   Y +N Y  + NI TD NK
Sbjct: 551 ADYQPDDKATENCVCILHNLSYQLEAELPEKYSQNIYIQNRNIQTDNNK 599


>BC044925-1|AAH44925.2|  830|Homo sapiens TLK2 protein protein.
          Length = 830

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +2

Query: 419 AGVKMEHFQAALDPRKQERLEARFLGGKVTQ 511
           A  +M     +LDPR+QE LEARF G  V++
Sbjct: 55  AAAEMMEELHSLDPRRQELLEARFTGVGVSK 85


>AF162667-1|AAF03095.1|  749|Homo sapiens tousled-like kinase 2
           protein.
          Length = 749

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 449 ALDPRKQERLEARFLGGKVTQ 511
           +LDPR+QE LEARF G  V++
Sbjct: 6   SLDPRRQELLEARFTGVGVSK 26


>AB004884-1|BAA20561.1|  719|Homo sapiens PKU-alpha protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 449 ALDPRKQERLEARFLGGKVTQ 511
           +LDPR+QE LEARF G  V++
Sbjct: 8   SLDPRRQELLEARFTGVGVSK 28


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,181,969
Number of Sequences: 237096
Number of extensions: 1753763
Number of successful extensions: 3562
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3562
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)