Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021948
         (589 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    27   0.34 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.4  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    24   3.2  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   3.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   7.3  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   9.7  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 0.34
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +1

Query: 46  RQHHPPRCHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 189
           +QHH    H   P     QQ+ S     P+  K + HD      +L P
Sbjct: 309 QQHHH---HQHQPQQQHQQQYHSHPHHTPVQFKTELHDNTQYDEELSP 353


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 31  LAWLSRQHHPPRCHNGSPSGNRHQQFPSQASTL 129
           LAW   Q + P+  N   + + HQQ  +Q   L
Sbjct: 406 LAWFGEQRNRPKDRNQPATLHHHQQVHNQQRIL 438


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 40  LSRQHHPPRCHNGSPSGNRHQQFPSQASTLP 132
           L+ QHH    H G PSG    +  S    LP
Sbjct: 58  LASQHHALSHHAGEPSGGGGGRAGSDEDELP 88


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 109 PSQASTLPISGKFQAHDINNQQSQLVPG 192
           P  AST P  G FQ+   NN  S ++PG
Sbjct: 10  PGAASTTPSPGAFQSLARNN--SYVIPG 35



 Score = 24.2 bits (50), Expect = 3.2
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 314 PSQASTLPISGKFQAHDINNQQSQLVPG 397
           P  AST P  G FQ+   NN  S ++PG
Sbjct: 10  PGAASTTPSPGAFQSLARNN--SYVIPG 35


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 497 QFPSKLQLYXYQVNSKLMTKQPTKSACPWP 586
           QF S    Y YQ++   +T  P   AC  P
Sbjct: 891 QFLSSHGFYAYQLHRMQLTGSPLCDACEEP 920


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 190 QGQADSVGCLCHELGIYLIWVKLKLVTEIADGGF 89
           +G  + V  L  ELGI  IW+     + +AD G+
Sbjct: 49  RGIMEKVPYLRRELGIDAIWLSPIFKSPMADFGY 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,796
Number of Sequences: 2352
Number of extensions: 11410
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)