Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021948
         (589 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,...    29   3.5  
X12836-1|CAA31321.1|  463|Drosophila melanogaster K10 protein pr...    29   6.2  
AY060415-1|AAL25454.1|  463|Drosophila melanogaster LD37240p pro...    29   6.2  
AL009195-3|CAA15702.1|  463|Drosophila melanogaster EG:30B8.5,FB...    29   6.2  
AE014298-367|AAF45758.1|  463|Drosophila melanogaster CG3218-PA ...    29   6.2  

>AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,
           isoform C protein.
          Length = 1173

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = +1

Query: 43  SRQHHPPRCHN-GSPSGNRHQQFPSQASTLPISGKF--QAHDINNQQSQLVPGFCA*HGF 213
           S + +PP  ++  SP  N H    S AS  PIS +   QAH   NQ S          G 
Sbjct: 199 SYRQYPPHSYSPNSPHSNGHTN--SNASNNPISQRSNPQAHPNQNQNSNFYEMCTGSGGS 256

Query: 214 HQFSRLYLSNFRHN 255
           H +  + +S  R N
Sbjct: 257 HTYGSMSVSLVRLN 270


>X12836-1|CAA31321.1|  463|Drosophila melanogaster K10 protein
           protein.
          Length = 463

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +1

Query: 40  LSRQHHPPRCHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 189
           + +Q HP       PS N+ QQ PS       S   Q H  +NQQ  L P
Sbjct: 125 IKQQQHPSPNQQQPPSPNQ-QQHPSPNQQQHPSPNQQQHPNSNQQQHLSP 173


>AY060415-1|AAL25454.1|  463|Drosophila melanogaster LD37240p
           protein.
          Length = 463

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +1

Query: 40  LSRQHHPPRCHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 189
           + +Q HP       PS N+ QQ PS       S   Q H  +NQQ  L P
Sbjct: 125 IKQQQHPSPNQQQPPSPNQ-QQHPSPNQQQHPSPNQQQHPNSNQQQHLSP 173


>AL009195-3|CAA15702.1|  463|Drosophila melanogaster
           EG:30B8.5,FBgn0000810;fs(1)K10 protein.
          Length = 463

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +1

Query: 40  LSRQHHPPRCHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 189
           + +Q HP       PS N+ QQ PS       S   Q H  +NQQ  L P
Sbjct: 125 IKQQQHPSPNQQQPPSPNQ-QQHPSPNQQQHPSPNQQQHPNSNQQQHLSP 173


>AE014298-367|AAF45758.1|  463|Drosophila melanogaster CG3218-PA
           protein.
          Length = 463

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +1

Query: 40  LSRQHHPPRCHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 189
           + +Q HP       PS N+ QQ PS       S   Q H  +NQQ  L P
Sbjct: 125 IKQQQHPSPNQQQPPSPNQ-QQHPSPNQQQHPSPNQQQHPNSNQQQHLSP 173


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,457,938
Number of Sequences: 53049
Number of extensions: 519306
Number of successful extensions: 1264
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)