Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021946
         (759 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F1F641 Cluster: PREDICTED: similar to phosphatid...    36   1.1  
UniRef50_A0D0A5 Cluster: Chromosome undetermined scaffold_33, wh...    34   3.3  
UniRef50_Q6MNV5 Cluster: Membrane-bound lytic murein transglycos...    33   5.8  
UniRef50_Q82E12 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  
UniRef50_Q8PSJ9 Cluster: Putative uncharacterized protein; n=3; ...    33   7.7  
UniRef50_Q74IS8 Cluster: Translation initiation factor IF-2; n=3...    33   7.7  

>UniRef50_UPI0000F1F641 Cluster: PREDICTED: similar to
           phosphatidylinositol glycan, class G,; n=1; Danio
           rerio|Rep: PREDICTED: similar to phosphatidylinositol
           glycan, class G, - Danio rerio
          Length = 673

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = +3

Query: 609 IERAKNRINESLNAVADEKKKVQVDENELGPNILADRRNKLETA 740
           ++  KN+I E  N + DEK+K++ ++N+L    L DR+ + + A
Sbjct: 72  LKEDKNKIKEDKNKIKDEKEKLKEEKNKLKEEKLQDRQRRKDAA 115


>UniRef50_A0D0A5 Cluster: Chromosome undetermined scaffold_33, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_33, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1179

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 15/54 (27%), Positives = 34/54 (62%)
 Frame = +3

Query: 576  RLSPERDETKAIERAKNRINESLNAVADEKKKVQVDENELGPNILADRRNKLET 737
            +L+  ++E K +ER ++ + + L ++ D+   ++ D+NEL  + L+++   LET
Sbjct: 904  QLNGHQNELKKLEREQHDLKQQLKSLEDQYDFIRQDKNELSQDRLSEKFRVLET 957


>UniRef50_Q6MNV5 Cluster: Membrane-bound lytic murein
           transglycosylase D precursor; n=1; Bdellovibrio
           bacteriovorus|Rep: Membrane-bound lytic murein
           transglycosylase D precursor - Bdellovibrio
           bacteriovorus
          Length = 526

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +3

Query: 111 LTEASQNKNQNRSVNSMVLHQTAIQIDIPRTVRLPGDTVEPPRAILAAQYINKNTSSY 284
           L  AS N  +NR    ++ H T    ++ R  RLP +T+      +AA+ I K+ + Y
Sbjct: 182 LAMASYNVGENRVKREVMNHYTRDFWELARKKRLPAETINYVPKFIAAKMIGKDPAKY 239


>UniRef50_Q82E12 Cluster: Putative uncharacterized protein; n=1;
           Streptomyces avermitilis|Rep: Putative uncharacterized
           protein - Streptomyces avermitilis
          Length = 699

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 472 RSATHADMPNRGERSPKGLLRFRLR-ELMTGEPEFAVSALRETKPR 606
           R+A    + + G+  P    R+RL  EL  G+ +FAV+ LR+T PR
Sbjct: 519 RAAHRTLIDHYGDEDPPDSARYRLHHELALGKADFAVAHLRDTFPR 564


>UniRef50_Q8PSJ9 Cluster: Putative uncharacterized protein; n=3;
           Methanosarcina|Rep: Putative uncharacterized protein -
           Methanosarcina mazei (Methanosarcina frisia)
          Length = 664

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
 Frame = +3

Query: 576 RLSPERDETKAIERAKNRINESLNAVADEKKKVQVDENELGPNILA-DRR-NKLETASQG 749
           R +PE+ E KA++ +  R+ E++    ++ + +Q    EL   + A DR+ +KLE+  +G
Sbjct: 414 RAAPEKPEEKAVDESFQRMRETVQRQGEQIQNLQEYVEELKQAMAAKDRKISKLESRLKG 473

Query: 750 WRK 758
           ++K
Sbjct: 474 FKK 476


>UniRef50_Q74IS8 Cluster: Translation initiation factor IF-2; n=3;
           Lactobacillus|Rep: Translation initiation factor IF-2 -
           Lactobacillus johnsonii
          Length = 880

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 582 SPERDETKAIERAKNRINESLNAVADEKKKVQVDENELGPNIL--ADRRNK 728
           +P+R + K +E  +    E L   A  K +VQ  +  +GP I+  +  RNK
Sbjct: 160 NPQRSKVKKVENTRKPKEEKLEGAAAVKARVQASQKPVGPKIIKPSPARNK 210


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,353,473
Number of Sequences: 1657284
Number of extensions: 13493644
Number of successful extensions: 41449
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41429
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)