Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021946
         (759 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF195494-1|AAG28466.1| 1106|Drosophila melanogaster Misexpressio...    31   1.7  
AE013599-2504|AAF57837.2| 2171|Drosophila melanogaster CG4903-PA...    31   1.7  
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB...    30   3.9  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    30   3.9  
AY089510-1|AAL90248.1|  697|Drosophila melanogaster GH20325p pro...    29   5.2  
AE013599-1631|AAF58428.1|  697|Drosophila melanogaster CG13325-P...    29   5.2  
X51753-1|CAA36042.1|  895|Drosophila melanogaster protein ( Dros...    29   9.1  
DQ025530-1|AAY45705.1|  831|Drosophila melanogaster TAK1-binding...    29   9.1  
BT010287-1|AAQ23605.1|  831|Drosophila melanogaster LD40663p pro...    29   9.1  
AJ277497-1|CAB89085.1|  831|Drosophila melanogaster transcriptio...    29   9.1  
AE013599-2854|AAF57580.2|  831|Drosophila melanogaster CG7417-PA...    29   9.1  

>AF195494-1|AAG28466.1| 1106|Drosophila melanogaster Misexpression
           suppressor of ras 4 protein.
          Length = 1106

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 212 SRRYGRTTPCDTCCSIHKQKHFFLYL 289
           S++  R   C  CCS+H+  HFFL++
Sbjct: 587 SQKQERFFRCSQCCSVHQCWHFFLHM 612


>AE013599-2504|AAF57837.2| 2171|Drosophila melanogaster CG4903-PA
           protein.
          Length = 2171

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 212 SRRYGRTTPCDTCCSIHKQKHFFLYL 289
           S++  R   C  CCS+H+  HFFL++
Sbjct: 588 SQKQERFFRCSQCCSVHQCWHFFLHM 613


>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
            isoform B protein.
          Length = 7744

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = +3

Query: 552  NDWRARVCRLSPERDETKAIERAKNRINESLNAVADEKKKVQVD-ENELG--PNILADRR 722
            +DW  R C+L PE  + + +      +N+ LN++ D++ ++ ++    LG     L D  
Sbjct: 6104 SDWMMRPCKLRPEAAQQELVS-----MNDLLNSIGDKRSQLMLEMTGSLGDEDTDLDDNI 6158

Query: 723  NKLET 737
            +KLE+
Sbjct: 6159 DKLES 6163


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = +3

Query: 552  NDWRARVCRLSPERDETKAIERAKNRINESLNAVADEKKKVQVD-ENELG--PNILADRR 722
            +DW  R C+L PE  + + +      +N+ LN++ D++ ++ ++    LG     L D  
Sbjct: 6104 SDWMMRPCKLRPEAAQQELVS-----MNDLLNSIGDKRSQLMLEMTGSLGDEDTDLDDNI 6158

Query: 723  NKLET 737
            +KLE+
Sbjct: 6159 DKLES 6163


>AY089510-1|AAL90248.1|  697|Drosophila melanogaster GH20325p
           protein.
          Length = 697

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/69 (26%), Positives = 32/69 (46%)
 Frame = -2

Query: 209 PHRSRDIDLNSCLVQHHRIHTSILIFILARFSELAF*YTLNLLILFYNSKDYDQLFRIIN 30
           P  +  I   SC         ++ IF++   S ++F   L+ L  ++  KD DQL  I+ 
Sbjct: 185 PSSAMRISEGSCQTSDSEPWDALTIFMIVILSLMSFIVALSTLWDYFLVKDQDQLPAIVK 244

Query: 29  AYTIRANGQ 3
             + R+N +
Sbjct: 245 ICSARSNSR 253


>AE013599-1631|AAF58428.1|  697|Drosophila melanogaster CG13325-PA
           protein.
          Length = 697

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/69 (26%), Positives = 32/69 (46%)
 Frame = -2

Query: 209 PHRSRDIDLNSCLVQHHRIHTSILIFILARFSELAF*YTLNLLILFYNSKDYDQLFRIIN 30
           P  +  I   SC         ++ IF++   S ++F   L+ L  ++  KD DQL  I+ 
Sbjct: 185 PSSAMRISEGSCQTSDSEPWDALTIFMIVILSLMSFIVALSTLWDYFLVKDQDQLPAIVK 244

Query: 29  AYTIRANGQ 3
             + R+N +
Sbjct: 245 ICSARSNSR 253


>X51753-1|CAA36042.1|  895|Drosophila melanogaster protein (
           Drosophila lethal(1)2Cb gene for sarcomeric alpha
           actinin. ).
          Length = 895

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 570 VCRLSPERDETKAIERAKNRINESLNAVADEKKKV 674
           V +L P+RD+T A ER K + NE L     EK  +
Sbjct: 610 VRQLVPQRDQTLANERRKQQNNEMLRRQFAEKANI 644


>DQ025530-1|AAY45705.1|  831|Drosophila melanogaster TAK1-binding
           protein protein.
          Length = 831

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 609 IERAKNRINESLNAVADEKKKVQVDENELGPNILAD 716
           IER K R ++  NA+ D KK++ V E E+  NIL +
Sbjct: 539 IERQKQRRDKLANALRDNKKRLLVLEQEI--NILTE 572


>BT010287-1|AAQ23605.1|  831|Drosophila melanogaster LD40663p
           protein.
          Length = 831

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 609 IERAKNRINESLNAVADEKKKVQVDENELGPNILAD 716
           IER K R ++  NA+ D KK++ V E E+  NIL +
Sbjct: 539 IERQKQRRDKLANALRDNKKRLLVLEQEI--NILTE 572


>AJ277497-1|CAB89085.1|  831|Drosophila melanogaster transcription
           factor protein.
          Length = 831

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 609 IERAKNRINESLNAVADEKKKVQVDENELGPNILAD 716
           IER K R ++  NA+ D KK++ V E E+  NIL +
Sbjct: 539 IERQKQRRDKLANALRDNKKRLLVLEQEI--NILTE 572


>AE013599-2854|AAF57580.2|  831|Drosophila melanogaster CG7417-PA
           protein.
          Length = 831

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 609 IERAKNRINESLNAVADEKKKVQVDENELGPNILAD 716
           IER K R ++  NA+ D KK++ V E E+  NIL +
Sbjct: 539 IERQKQRRDKLANALRDNKKRLLVLEQEI--NILTE 572


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,046,647
Number of Sequences: 53049
Number of extensions: 644309
Number of successful extensions: 2004
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2004
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)