Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021944
(642 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL391602-1|CAI12788.3| 1661|Homo sapiens novel protein protein. 33 1.1
AL132768-4|CAI21460.3| 1661|Homo sapiens novel protein protein. 33 1.1
AL079335-1|CAI42289.3| 1661|Homo sapiens novel protein protein. 33 1.1
BC109037-1|AAI09038.1| 723|Homo sapiens zinc finger protein 750... 31 4.6
BC109036-1|AAI09037.1| 723|Homo sapiens zinc finger protein 750... 31 4.6
AK023903-1|BAB14718.1| 723|Homo sapiens protein ( Homo sapiens ... 31 4.6
BC117211-1|AAI17212.1| 979|Homo sapiens NLRP3 protein protein. 30 6.1
AY422168-1|AAQ98889.1| 977|Homo sapiens cryopyrin deletion 4 is... 30 6.1
AY092033-1|AAM14669.1| 922|Homo sapiens NALP3 intermediate isof... 30 6.1
AY051117-2|AAL12498.1| 920|Homo sapiens cryopyrin protein. 30 6.1
AL606804-11|CAI17155.1| 977|Homo sapiens NLR family, pyrin doma... 30 6.1
AL606804-9|CAI17154.1| 922|Homo sapiens NLR family, pyrin domai... 30 6.1
AF427617-1|AAL33911.1| 920|Homo sapiens cryopyrin protein. 30 6.1
AF009616-1|AAB70909.1| 445|Homo sapiens FLAME-1 protein. 30 8.0
>AL391602-1|CAI12788.3| 1661|Homo sapiens novel protein protein.
Length = 1661
Score = 32.7 bits (71), Expect = 1.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 308 NNAAALSCYTGSVSPCSVRVGEGPVRHEPHSCRRPPA 418
N A C T S++ C R +RH P CR P+
Sbjct: 1610 NEDAVCDCSTQSLTSCFARSSRSAIRHSPSKCRLHPS 1646
>AL132768-4|CAI21460.3| 1661|Homo sapiens novel protein protein.
Length = 1661
Score = 32.7 bits (71), Expect = 1.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 308 NNAAALSCYTGSVSPCSVRVGEGPVRHEPHSCRRPPA 418
N A C T S++ C R +RH P CR P+
Sbjct: 1610 NEDAVCDCSTQSLTSCFARSSRSAIRHSPSKCRLHPS 1646
>AL079335-1|CAI42289.3| 1661|Homo sapiens novel protein protein.
Length = 1661
Score = 32.7 bits (71), Expect = 1.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 308 NNAAALSCYTGSVSPCSVRVGEGPVRHEPHSCRRPPA 418
N A C T S++ C R +RH P CR P+
Sbjct: 1610 NEDAVCDCSTQSLTSCFARSSRSAIRHSPSKCRLHPS 1646
>BC109037-1|AAI09038.1| 723|Homo sapiens zinc finger protein 750
protein.
Length = 723
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 281 ASKSSSKTRNNAAALSCYTGSVSPCSVRVGEGPVRHEPHSCRR 409
A SS + + AA C + SP ++RVG+G +CR+
Sbjct: 623 AVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPEPACRQ 665
>BC109036-1|AAI09037.1| 723|Homo sapiens zinc finger protein 750
protein.
Length = 723
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 281 ASKSSSKTRNNAAALSCYTGSVSPCSVRVGEGPVRHEPHSCRR 409
A SS + + AA C + SP ++RVG+G +CR+
Sbjct: 623 AVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPEPACRQ 665
>AK023903-1|BAB14718.1| 723|Homo sapiens protein ( Homo sapiens
cDNA FLJ13841 fis, clone THYRO1000787. ).
Length = 723
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 281 ASKSSSKTRNNAAALSCYTGSVSPCSVRVGEGPVRHEPHSCRR 409
A SS + + AA C + SP ++RVG+G +CR+
Sbjct: 623 AVDSSEEQKQTAAVALCQLAAYSPRNIRVGDGDAAAPEPACRQ 665
>BC117211-1|AAI17212.1| 979|Homo sapiens NLRP3 protein protein.
Length = 979
Score = 30.3 bits (65), Expect = 6.1
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +3
Query: 132 FVIKCLNYYFKIKSFVCEVVTNSRNTSEFRCQRGC*PPLFRTIQLGFEKTQARAAPKHET 311
FV + ++Y+ KI+ + T + C C ++ LGF + + E
Sbjct: 642 FVQRAMDYFPKIE---INLSTRMDHMVSSFCIENC--HRVESLSLGFLHNMPKEEEEEEK 696
Query: 312 MQRH*AATQVV---SRHAACGWEKGLCAMSH 395
RH Q V S HAAC G C +SH
Sbjct: 697 EGRHLDMVQCVLPSSSHAACSHGLGRCGLSH 727
>AY422168-1|AAQ98889.1| 977|Homo sapiens cryopyrin deletion 4
isoform protein.
Length = 977
Score = 30.3 bits (65), Expect = 6.1
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +3
Query: 132 FVIKCLNYYFKIKSFVCEVVTNSRNTSEFRCQRGC*PPLFRTIQLGFEKTQARAAPKHET 311
FV + ++Y+ KI+ + T + C C ++ LGF + + E
Sbjct: 640 FVQRAMDYFPKIE---INLSTRMDHMVSSFCIENC--HRVESLSLGFLHNMPKEEEEEEK 694
Query: 312 MQRH*AATQVV---SRHAACGWEKGLCAMSH 395
RH Q V S HAAC G C +SH
Sbjct: 695 EGRHLDMVQCVLPSSSHAACSHGLGRCGLSH 725
>AY092033-1|AAM14669.1| 922|Homo sapiens NALP3 intermediate isoform
protein.
Length = 922
Score = 30.3 bits (65), Expect = 6.1
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +3
Query: 132 FVIKCLNYYFKIKSFVCEVVTNSRNTSEFRCQRGC*PPLFRTIQLGFEKTQARAAPKHET 311
FV + ++Y+ KI+ + T + C C ++ LGF + + E
Sbjct: 642 FVQRAMDYFPKIE---INLSTRMDHMVSSFCIENC--HRVESLSLGFLHNMPKEEEEEEK 696
Query: 312 MQRH*AATQVV---SRHAACGWEKGLCAMSH 395
RH Q V S HAAC G C +SH
Sbjct: 697 EGRHLDMVQCVLPSSSHAACSHGLGRCGLSH 727
>AY051117-2|AAL12498.1| 920|Homo sapiens cryopyrin protein.
Length = 920
Score = 30.3 bits (65), Expect = 6.1
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +3
Query: 132 FVIKCLNYYFKIKSFVCEVVTNSRNTSEFRCQRGC*PPLFRTIQLGFEKTQARAAPKHET 311
FV + ++Y+ KI+ + T + C C ++ LGF + + E
Sbjct: 640 FVQRAMDYFPKIE---INLSTRMDHMVSSFCIENC--HRVESLSLGFLHNMPKEEEEEEK 694
Query: 312 MQRH*AATQVV---SRHAACGWEKGLCAMSH 395
RH Q V S HAAC G C +SH
Sbjct: 695 EGRHLDMVQCVLPSSSHAACSHGLGRCGLSH 725
>AL606804-11|CAI17155.1| 977|Homo sapiens NLR family, pyrin domain
containing 3 protein.
Length = 977
Score = 30.3 bits (65), Expect = 6.1
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +3
Query: 132 FVIKCLNYYFKIKSFVCEVVTNSRNTSEFRCQRGC*PPLFRTIQLGFEKTQARAAPKHET 311
FV + ++Y+ KI+ + T + C C ++ LGF + + E
Sbjct: 640 FVQRAMDYFPKIE---INLSTRMDHMVSSFCIENC--HRVESLSLGFLHNMPKEEEEEEK 694
Query: 312 MQRH*AATQVV---SRHAACGWEKGLCAMSH 395
RH Q V S HAAC G C +SH
Sbjct: 695 EGRHLDMVQCVLPSSSHAACSHGLGRCGLSH 725
>AL606804-9|CAI17154.1| 922|Homo sapiens NLR family, pyrin domain
containing 3 protein.
Length = 922
Score = 30.3 bits (65), Expect = 6.1
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +3
Query: 132 FVIKCLNYYFKIKSFVCEVVTNSRNTSEFRCQRGC*PPLFRTIQLGFEKTQARAAPKHET 311
FV + ++Y+ KI+ + T + C C ++ LGF + + E
Sbjct: 642 FVQRAMDYFPKIE---INLSTRMDHMVSSFCIENC--HRVESLSLGFLHNMPKEEEEEEK 696
Query: 312 MQRH*AATQVV---SRHAACGWEKGLCAMSH 395
RH Q V S HAAC G C +SH
Sbjct: 697 EGRHLDMVQCVLPSSSHAACSHGLGRCGLSH 727
>AF427617-1|AAL33911.1| 920|Homo sapiens cryopyrin protein.
Length = 920
Score = 30.3 bits (65), Expect = 6.1
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +3
Query: 132 FVIKCLNYYFKIKSFVCEVVTNSRNTSEFRCQRGC*PPLFRTIQLGFEKTQARAAPKHET 311
FV + ++Y+ KI+ + T + C C ++ LGF + + E
Sbjct: 640 FVQRAMDYFPKIE---INLSTRMDHMVSSFCIENC--HRVESLSLGFLHNMPKEEEEEEK 694
Query: 312 MQRH*AATQVV---SRHAACGWEKGLCAMSH 395
RH Q V S HAAC G C +SH
Sbjct: 695 EGRHLDMVQCVLPSSSHAACSHGLGRCGLSH 725
>AF009616-1|AAB70909.1| 445|Homo sapiens FLAME-1 protein.
Length = 445
Score = 29.9 bits (64), Expect = 8.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 215 FRSIPRVRYNFTHKTFNFEIIVQALNNKTTPRTALL*VFQLIN*QKTTLSYRKQKLIHV 39
FRSIP RY K +I+ + N+T +L+ T+L Y QK +H+
Sbjct: 201 FRSIPEERYKMKSKPLGICLIIDCIGNET----------ELLRDTFTSLGYEVQKFLHL 249
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,526,748
Number of Sequences: 237096
Number of extensions: 1803479
Number of successful extensions: 4335
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4335
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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