Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021944
         (642 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          25   0.47 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.5  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   3.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   5.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.7  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 454 NDDLSASLCSQPCGWPPTGVWLMAHR 377
           N D+S +  S   G P T +W  AHR
Sbjct: 425 NHDMSLTKASATFGIPSTTLWQRAHR 450


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 194 RYNFTHKTFNFEIIVQA 144
           +Y   HK FNF I + A
Sbjct: 492 QYRLNHKPFNFHITINA 508


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 194 RYNFTHKTFNFEIIVQA 144
           +Y   HK FNF I + A
Sbjct: 492 QYRLNHKPFNFHITINA 508


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 218 EFRSIPRVRYNFTHKTFNFEI 156
           EFR   R+RY   HK F + +
Sbjct: 597 EFRRQERMRYAAPHKAFTYRM 617


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 268 VLRKRKQEQLQNTKQCSG 321
           +LR +K+E+LQ    C G
Sbjct: 355 LLRVKKEEELQEAPSCGG 372


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 626 LVQTARPAHVGGEAGDRAELPDDPSV 549
           LV+   P H+ G +   A  P  PSV
Sbjct: 32  LVKAETPEHLAGTSTTAAATPTPPSV 57


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 400 GVWLMAHRPFSHPHAAWRD 344
           GVW+++    S P A W D
Sbjct: 159 GVWILSGAISSPPLAGWND 177


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 400 GVWLMAHRPFSHPHAAWRD 344
           GVW+++    S P A W D
Sbjct: 159 GVWILSGAISSPPLAGWND 177


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 400 GVWLMAHRPFSHPHAAWRD 344
           GVW+++    S P A W D
Sbjct: 159 GVWILSGAISSPPLAGWND 177


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = -2

Query: 416 RVAAYRSVAH-GAQAL-LPPARCMARHYLCSSLMPLHCFV 303
           R+  Y S+   GA  + LPP   M   +  S   P HC V
Sbjct: 157 RMIVYVSLVWLGAACISLPPLLIMGNEHTYSETGPSHCVV 196


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 441 DRSSLPQLRVRRKANLSPNMCSQTAFLQGQHGVARADGGVVGQLGAVARL 590
           D+ SLPQ+   +   +     S+    + QH   +   G+V   G+ A L
Sbjct: 243 DQMSLPQMLADKIGKMVNQKFSELIQSKPQHARRKVLAGIVQTKGSDAEL 292


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,190
Number of Sequences: 438
Number of extensions: 3423
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)