Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021940
         (748 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.81 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   1.1  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            25   2.5  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       24   4.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
 Frame = -1

Query: 499  PYNFSLRSTSSKGSVSHPSDFKAGCTS-K*P*IQTVFFFGSLPNTPTKTGGS---*TSLP 332
            P+   L  TSSK + +HPS   A   S   P + T    G   NTP          T+  
Sbjct: 726  PHGAPLALTSSKSASTHPSPHPATRASPSSPIVATSSSGGGGSNTPNSAAAPHPYYTAAA 785

Query: 331  SIV*KPTSLNSVVAPTSFNLSCIQ*TYGCNPHDISH 224
                 P SL+S   P   +        G   H + H
Sbjct: 786  MAAASPLSLSSKAPPHPHSALSSHSPVGAGSHHLHH 821


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 70   YHQHYSVSSKQVSAKMATEKTLPEIFKYVDQNKDSYKQL 186
            YHQ   +  +    K+  +K   EI K  ++NKD Y ++
Sbjct: 891  YHQRDKLLKQNDELKLEIKKKENEITKVRNENKDGYDRI 929


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +1

Query: 22  LIKLPATKQLVPFFPAYHQHYSVSSKQVSAKMATEKTLPEIFKYVDQNKD 171
           LI  P++ Q     P   Q  S SSK   +       L EI+K+  +N D
Sbjct: 662 LIFAPSSNQSSSSTPNAEQSPSASSKDTFSNEYVLTNLDEIYKFEIENDD 711


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
 Frame = +3

Query: 381 DPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNEKL-----YGRGSLMIKDLYLVGCT 545
           D    +V     + V  AL   G  +EPFE      K      YGR S ++  +  VGC 
Sbjct: 252 DIVSESVAAEAEMIVASALYFKGLWSEPFEPQATELKPFYPDGYGRESKLVPSMSTVGCY 311

Query: 546 P 548
           P
Sbjct: 312 P 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,692
Number of Sequences: 2352
Number of extensions: 17584
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)