Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021940
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   4.0  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   5.3  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   5.3  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    22   7.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   9.3  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 60  FSCLSSTLFSEFQTSFCK 113
           F CL+ST+ SE   + CK
Sbjct: 15  FLCLASTILSESAGTSCK 32


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -1

Query: 631 FGTRFLHTFENELQ-IDRQLSTSALIGIDGVQPTKYRSFIISEPRPYNFSLRSTSSKGSV 455
           +GTR      + L+ +D++      IG+   + T +  ++     P+++  RST  +   
Sbjct: 187 YGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDDYLDYAINPFDYEKRSTDFQDVE 246

Query: 454 SHPSDFK 434
           S    FK
Sbjct: 247 SGSESFK 253


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -1

Query: 631 FGTRFLHTFENELQ-IDRQLSTSALIGIDGVQPTKYRSFIISEPRPYNFSLRSTSSKGSV 455
           +GTR      + L+ +D++      IG+   + T +  ++     P+++  RST  +   
Sbjct: 187 YGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDDYLDYAINPFDYEKRSTDFQDVE 246

Query: 454 SHPSDFK 434
           S    FK
Sbjct: 247 SGSESFK 253


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 450 IHQISKQVVHPNDHRYKLYF 391
           I  +S   +H N++  KLY+
Sbjct: 315 ISSLSNNTIHNNNYNKKLYY 334


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +2

Query: 548 INAYKGTGAELPVNLKFIFECMEESGSEGLTAY*WTN 658
           +  + G     P +  +I+  +    S GLT   WTN
Sbjct: 160 LEEWTGKNITTPWDYYYIYHTLVAEQSYGLTLPSWTN 196


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +2

Query: 548 INAYKGTGAELPVNLKFIFECMEESGSEGLTAY*WTN 658
           +  + G     P +  +I+  +    S GLT   WTN
Sbjct: 175 LEEWTGKNITTPWDYYYIYHTLVAEQSYGLTLPSWTN 211


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +2

Query: 548 INAYKGTGAELPVNLKFIFECMEESGSEGLTAY*WTN 658
           +  + G     P +  +I+  +    S GLT   WTN
Sbjct: 63  LEEWTGKNITTPWDYYYIYHTLVAEQSYGLTLPSWTN 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,488
Number of Sequences: 438
Number of extensions: 4466
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)