Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021937X
         (434 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    25   0.31 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.8  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    20   8.9  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    20   8.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   8.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   8.9  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 345 CKGYWI*SFRKDVSWALTVTGSCMI 419
           CKG++  + RKD+S+A     +C+I
Sbjct: 106 CKGFFKRTVRKDLSYACREEKNCII 130


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 40  TGGPKPFQFHQDRW 81
           +G   PF +H D+W
Sbjct: 925 SGATGPFAYHGDQW 938


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
          optomotor-blind-like protein protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 58 FQFHQDRWASKGSA 99
          ++FH  RW   G A
Sbjct: 33 YKFHNSRWMVAGKA 46


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
          optomotor-blind-like protein protein.
          Length = 134

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 58 FQFHQDRWASKGSA 99
          ++FH  RW   G A
Sbjct: 33 YKFHNSRWMVAGKA 46


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 395 DGDRLLHDQDSGS 433
           +GD+L  D+D+GS
Sbjct: 24  EGDKLEGDEDTGS 36


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 264 VDLFVEFVEYGYRGPKPAPS 323
           + ++ +  +YGY    P PS
Sbjct: 385 IKMYADMHQYGYNTLSPLPS 404


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,272
Number of Sequences: 336
Number of extensions: 1472
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)