Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021937X
(434 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89754-1|CAA61901.1| 140|Homo sapiens T cell antigen receptor b... 35 0.14
X74844-1|CAA52837.1| 135|Homo sapiens T-cell receptor beta chai... 35 0.14
X58805-1|CAA41611.1| 114|Homo sapiens V beta immunoglobulin pro... 35 0.14
U66060-15|AAC13332.1| 116|Homo sapiens V_segment translation pr... 35 0.14
M27386-1|AAD15190.1| 121|Homo sapiens T-cell receptor beta prot... 35 0.14
M27385-1|AAD15187.1| 133|Homo sapiens T-cell receptor beta prot... 35 0.14
L34734-1|AAA82682.1| 311|Homo sapiens T-cell receptor beta prot... 35 0.14
AF009661-1|AAB63895.1| 116|Homo sapiens TCRBV6S4 protein. 35 0.14
M15564-1|AAA61027.1| 310|Homo sapiens TCRB protein. 34 0.18
X64742-1|CAA46005.1| 133|Homo sapiens T cell receptor V-beta 6... 34 0.24
D13085-1|BAA02397.1| 114|Homo sapiens T-cell receptor beta-chai... 34 0.24
AF009663-17|AAB63907.1| 116|Homo sapiens TCRBV6S4 protein. 34 0.24
U66060-10|AAC13329.1| 116|Homo sapiens V_segment translation pr... 32 0.98
L14483-1|AAA61267.1| 96|Homo sapiens T-cell receptor V beta ch... 32 0.98
AF009663-12|AAB63905.1| 116|Homo sapiens TCRBV6S6 protein. 32 0.98
X61441-1|CAA43681.1| 116|Homo sapiens TCR V-beta 6.3 protein. 30 4.0
U66060-13|AAC13330.1| 116|Homo sapiens V_segment translation pr... 30 4.0
U66060-2|AAC13324.1| 116|Homo sapiens V_segment translation pro... 30 4.0
M27384-1|AAD15184.1| 130|Homo sapiens T-cell receptor beta prot... 30 4.0
M27383-1|AAD15181.1| 139|Homo sapiens T-cell receptor beta prot... 30 4.0
M14260-1|AAA60686.1| 133|Homo sapiens TCRB protein. 30 4.0
M11953-1|AAA60702.1| 115|Homo sapiens protein ( Human T-cell re... 30 4.0
M11952-1|AAA61024.1| 134|Homo sapiens protein ( Human T-cell re... 30 4.0
L14432-1|AAA61262.1| 96|Homo sapiens T-cell receptor V beta ch... 30 4.0
L14431-1|AAA61261.1| 95|Homo sapiens T-cell receptor V beta ch... 30 4.0
L13762-1|AAA61260.1| 95|Homo sapiens T-cell receptor V beta c... 30 4.0
AF542062-1|AAN28670.1| 128|Homo sapiens T-cell receptor beta-ch... 30 4.0
AF009663-15|AAB63906.1| 116|Homo sapiens TCRBV6S2 protein. 30 4.0
AF009663-3|AAB63903.1| 116|Homo sapiens TCRBV6S8 protein. 30 4.0
AF009662-2|AAC18431.1| 116|Homo sapiens TCRBV6S8 protein. 30 4.0
>X89754-1|CAA61901.1| 140|Homo sapiens T cell antigen receptor beta
chain protein.
Length = 140
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSNTR 318
DHA G Q PRH + +R VTF D S + R
Sbjct: 17 DHADTGVSQNPRHKITKRGQNVTFRCDPISEHNR 50
>X74844-1|CAA52837.1| 135|Homo sapiens T-cell receptor beta chain
protein.
Length = 135
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSNTR 318
DHA G Q PRH + +R VTF D S + R
Sbjct: 9 DHADTGVSQNPRHKITKRGQNVTFRCDPISEHNR 42
>X58805-1|CAA41611.1| 114|Homo sapiens V beta immunoglobulin
protein.
Length = 114
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSNTR 318
DHA G Q PRH + +R VTF D S + R
Sbjct: 17 DHADTGVSQNPRHKITKRGQNVTFRCDPISEHNR 50
>U66060-15|AAC13332.1| 116|Homo sapiens V_segment translation
product protein.
Length = 116
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSNTR 318
DHA G Q PRH + +R VTF D S + R
Sbjct: 17 DHADTGVSQNPRHKITKRGQNVTFRCDPISEHNR 50
>M27386-1|AAD15190.1| 121|Homo sapiens T-cell receptor beta
protein.
Length = 121
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSNTR 318
DHA G Q PRH + +R VTF D S + R
Sbjct: 4 DHADTGVSQNPRHKITKRGQNVTFRCDPISEHNR 37
>M27385-1|AAD15187.1| 133|Homo sapiens T-cell receptor beta
protein.
Length = 133
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSNTR 318
DHA G Q PRH + +R VTF D S + R
Sbjct: 9 DHADTGVSQNPRHKITKRGQNVTFRCDPISEHNR 42
>L34734-1|AAA82682.1| 311|Homo sapiens T-cell receptor beta
protein.
Length = 311
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSNTR 318
DHA G Q PRH + +R VTF D S + R
Sbjct: 17 DHADTGVSQNPRHKITKRGQNVTFRCDPISEHNR 50
>AF009661-1|AAB63895.1| 116|Homo sapiens TCRBV6S4 protein.
Length = 116
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSNTR 318
DHA G Q PRH + +R VTF D S + R
Sbjct: 17 DHADTGVSQNPRHKITKRGQNVTFRCDPISEHNR 50
>M15564-1|AAA61027.1| 310|Homo sapiens TCRB protein.
Length = 310
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSNTR 318
DHA G Q PRH + +R VTF D S + R
Sbjct: 17 DHADTGVSQNPRHNITKRGQNVTFRCDPISEHNR 50
>X64742-1|CAA46005.1| 133|Homo sapiens T cell receptor V-beta 6.9b
protein.
Length = 133
Score = 33.9 bits (74), Expect = 0.24
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSNTR 318
DHA G Q PRH + +R VTF D S + R
Sbjct: 9 DHADTGVSQDPRHKITKRGQNVTFRCDPISEHNR 42
>D13085-1|BAA02397.1| 114|Homo sapiens T-cell receptor beta-chain V
region protein.
Length = 114
Score = 33.9 bits (74), Expect = 0.24
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSNTR 318
DHA G Q PRH + +R VTF D S + R
Sbjct: 17 DHADTGVSQDPRHKITKRGQNVTFRCDPISEHNR 50
>AF009663-17|AAB63907.1| 116|Homo sapiens TCRBV6S4 protein.
Length = 116
Score = 33.9 bits (74), Expect = 0.24
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSNTR 318
DHA G Q PRH + +R VTF D S + R
Sbjct: 17 DHADTGVSQDPRHKITKRGQNVTFRCDPISEHNR 50
>U66060-10|AAC13329.1| 116|Homo sapiens V_segment translation
product protein.
Length = 116
Score = 31.9 bits (69), Expect = 0.98
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ + +R VT D SS+
Sbjct: 17 DHTGAGVSQSPRYKVTKRGQDVTLRCDPISSH 48
>L14483-1|AAA61267.1| 96|Homo sapiens T-cell receptor V beta chain
6.14 protein.
Length = 96
Score = 31.9 bits (69), Expect = 0.98
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ + +R VT D SS+
Sbjct: 7 DHTGAGVSQSPRYKVTKRGQDVTLRCDPISSH 38
>AF009663-12|AAB63905.1| 116|Homo sapiens TCRBV6S6 protein.
Length = 116
Score = 31.9 bits (69), Expect = 0.98
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ + +R VT D SS+
Sbjct: 17 DHTGAGVSQSPRYKVTKRGQDVTLRCDPISSH 48
>X61441-1|CAA43681.1| 116|Homo sapiens TCR V-beta 6.3 protein.
Length = 116
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D S +
Sbjct: 17 DHTGAGVSQSPRYKVAKRGQDVALRCDPISGH 48
>U66060-13|AAC13330.1| 116|Homo sapiens V_segment translation
product protein.
Length = 116
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D S +
Sbjct: 17 DHTGAGVSQSPRYKVAKRGQDVALRCDPISGH 48
>U66060-2|AAC13324.1| 116|Homo sapiens V_segment translation
product protein.
Length = 116
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D+ S +
Sbjct: 17 DHTGAGVSQSPRYKVAKRGRDVALRCDSISGH 48
>M27384-1|AAD15184.1| 130|Homo sapiens T-cell receptor beta
protein.
Length = 130
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D S +
Sbjct: 6 DHTGAGVSQSPRYKVAKRGQDVALRCDPISGH 37
>M27383-1|AAD15181.1| 139|Homo sapiens T-cell receptor beta
protein.
Length = 139
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D S +
Sbjct: 17 DHTGAGVSQSPRYKVAKRGQDVALRCDPISGH 48
>M14260-1|AAA60686.1| 133|Homo sapiens TCRB protein.
Length = 133
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D S +
Sbjct: 17 DHTGAGVSQSPRYKVAKRGQDVALRCDPISGH 48
>M11953-1|AAA60702.1| 115|Homo sapiens protein ( Human T-cell
receptor germline beta chain gene V-region (V)
V-beta-ATL12-2. ).
Length = 115
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D S +
Sbjct: 17 DHTGAGVSQSPRYKVAKRGQDVALRCDPISGH 48
>M11952-1|AAA61024.1| 134|Homo sapiens protein ( Human T-cell
receptor rearranged beta chain gene V-region (V-D-J)
V-beta-ATL12-2. ).
Length = 134
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D S +
Sbjct: 17 DHTGAGVSQSPRYKVAKRGQDVALRCDPISGH 48
>L14432-1|AAA61262.1| 96|Homo sapiens T-cell receptor V beta chain
6.11 protein.
Length = 96
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D+ S +
Sbjct: 7 DHTGAGVSQSPRYKVAKRGRDVALRCDSISGH 38
>L14431-1|AAA61261.1| 95|Homo sapiens T-cell receptor V beta chain
6.11 protein.
Length = 95
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D+ S +
Sbjct: 7 DHTGAGVSQSPRYKVAKRGRDVALRCDSISGH 38
>L13762-1|AAA61260.1| 95|Homo sapiens T-cell receptor V beta
chain 6.11 protein.
Length = 95
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D+ S +
Sbjct: 7 DHTGAGVSQSPRYKVAKRGRDVALRCDSISGH 38
>AF542062-1|AAN28670.1| 128|Homo sapiens T-cell receptor beta-chain
V-region protein.
Length = 128
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D S +
Sbjct: 17 DHTGAGVSQSPRYKVAKRGQDVALRCDPISGH 48
>AF009663-15|AAB63906.1| 116|Homo sapiens TCRBV6S2 protein.
Length = 116
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D S +
Sbjct: 17 DHTGAGVSQSPRYKVAKRGQDVALRCDPISGH 48
>AF009663-3|AAB63903.1| 116|Homo sapiens TCRBV6S8 protein.
Length = 116
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D+ S +
Sbjct: 17 DHTGAGVSQSPRYKVAKRGRDVALRCDSISGH 48
>AF009662-2|AAC18431.1| 116|Homo sapiens TCRBV6S8 protein.
Length = 116
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 419 DHAGAGHRQRPRHVLAERSDPVTFALDAFSSN 324
DH GAG Q PR+ +A+R V D+ S +
Sbjct: 17 DHTGAGVSQSPRYKVAKRGRDVALRCDSISGH 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,857,582
Number of Sequences: 237096
Number of extensions: 1029885
Number of successful extensions: 2445
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2445
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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