Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021937X
         (434 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68303-6|CAD89754.1|  708|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z68303-5|CAA92639.2|  706|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical ...    28   3.4  
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical...    27   7.8  

>Z68303-6|CAD89754.1|  708|Caenorhabditis elegans Hypothetical
           protein ZK809.5b protein.
          Length = 708

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -1

Query: 311 LRAPVTVLDELDKEVDVQPPHASAR*VSRRIFSAGRDSDPVVDSFAK 171
           +R  +  LD++ KE+D    H S    SR++F     +  + D F +
Sbjct: 436 IRQRIQNLDDIAKELDASVEHFSTGGASRKLFDKNETNVELYDDFCR 482


>Z68303-5|CAA92639.2|  706|Caenorhabditis elegans Hypothetical
           protein ZK809.5a protein.
          Length = 706

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -1

Query: 311 LRAPVTVLDELDKEVDVQPPHASAR*VSRRIFSAGRDSDPVVDSFAK 171
           +R  +  LD++ KE+D    H S    SR++F     +  + D F +
Sbjct: 434 IRQRIQNLDDIAKELDASVEHFSTGGASRKLFDKNETNVELYDDFCR 480


>Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical
           protein F40F8.5 protein.
          Length = 420

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 428 PNPDHAGAGHRQRPRHVLAERS 363
           PN DH G  H++  RHV+A RS
Sbjct: 331 PNVDHTGHNHKR--RHVIASRS 350


>AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical
            protein F54C4.3 protein.
          Length = 1145

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -1

Query: 401  HRQRPRHVLAERSDPVTFALDAFSSNTRGRLRAPVTVLDELDKEVDVQPP 252
            HRQR    L ++ DP+         +   R+R P   + ELD+E  + PP
Sbjct: 932  HRQR----LYQKLDPMPVISHELPRSPSRRIRIPTRKIQELDQESVLPPP 977


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
            W02C12.1 protein.
          Length = 1372

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 289  STNSTKRSTCNLPMHQPAEFL 227
            +T ST+R  CN P  +P +FL
Sbjct: 1084 ATMSTRREQCNTPKCKPGQFL 1104


>AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical
           protein Y48C3A.14 protein.
          Length = 855

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 139 GGARAVVSKSHPSWLSLCSPTCPGETGKASG 47
           GG   + ++SHP W   C+  CP   G   G
Sbjct: 724 GGVMLLDTQSHPKWRMTCN-KCPSVVGLFEG 753


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,472,964
Number of Sequences: 27780
Number of extensions: 146139
Number of successful extensions: 445
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)