Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021936
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   1.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   6.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.9  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -2

Query: 190 PPSVCQHHQKLFRYPPSDRTRKSSFSQYIIIRPK 89
           PP   QH   LF Y    + ++ + ++   +RPK
Sbjct: 223 PPQWYQHQPLLFTYTDDGKNQQRTGTELTKMRPK 256


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 679 NVFQMIF*FVIFKLYVQTVFYAYFHF 602
           N++ ++  FVI  LYV T+ YA +++
Sbjct: 98  NLYYLLL-FVINVLYVLTLCYAVYYW 122


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 6   FAGVSSPFFQCFTQFYRYY 62
           F  V S F  C TQFY  Y
Sbjct: 237 FLFVLSTFSICITQFYYCY 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,194
Number of Sequences: 336
Number of extensions: 4414
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)