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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021936
         (746 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0439 + 19096711-19096713,19096819-19096893,19097037-190971...   105   4e-23
11_06_0454 + 23786984-23786986,23787062-23787136,23787242-237873...   105   4e-23
03_05_0682 - 26691973-26692623,26692681-26692788,26694741-266948...   103   2e-22
09_04_0397 + 17273013-17273570                                         30   2.2  
02_05_0863 + 32313890-32314132,32314227-32314517,32315157-323154...    29   3.9  
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528...    29   3.9  
07_03_1450 + 26620178-26620456,26622122-26622775                       28   6.9  
01_06_0909 - 32903520-32903828,32903899-32903973,32904068-329042...    28   6.9  
10_08_0858 - 21108283-21108387,21108820-21108889,21109490-211096...    28   9.1  
09_04_0475 - 17913982-17914772,17914830-17915156,17915323-179154...    28   9.1  
05_07_0192 - 28314224-28316287                                         28   9.1  

>12_02_0439 +
           19096711-19096713,19096819-19096893,19097037-19097111,
           19097225-19097297,19097536-19097580,19098217-19098328,
           19098794-19098866,19099178-19099222,19100216-19100271,
           19100370-19100545,19101289-19101476
          Length = 306

 Score =  105 bits (252), Expect = 4e-23
 Identities = 46/85 (54%), Positives = 66/85 (77%)
 Frame = +3

Query: 255 SGKVNVTLRKPGSKLEHQGIKVELIGQIELFYDRGNHHEFISLVKELARPGDLLQHTSYP 434
           SG+V+V +  PG ++EH G+K+EL+GQIEL+ +RG  ++F SLV+EL  PG++ +  +YP
Sbjct: 49  SGEVSV-VPVPGKRIEHLGVKIELLGQIELYLERGKFYDFTSLVRELDIPGEIYEKKTYP 107

Query: 435 FEFANVEKPYEVYTGSNVRLRYFLR 509
           FEF+ VE PYE Y G+NVRLRY L+
Sbjct: 108 FEFSTVEMPYESYNGTNVRLRYILK 132



 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 42/56 (75%), Positives = 46/56 (82%)
 Frame = +2

Query: 551 DIAVHTLCSYPDVLNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIK 718
           +  V      P + NSIKMEVGIEDCLHIEFEY+KSKYHLKDVI+GKIYFLLVRIK
Sbjct: 150 EFCVRNYSPAPTINNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIIGKIYFLLVRIK 205



 Score = 33.1 bits (72), Expect = 0.24
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 133 FGQTADIEIVFDDADKRKVAEVKTDDGKKEKLLLYYDGETVPGK 264
           F    DI I F DA  RK   VK D+G+   + ++   ET+ G+
Sbjct: 8   FKPPCDISIAFSDARSRKQIAVKNDNGRTVMVPVFQSLETISGE 51


>11_06_0454 +
           23786984-23786986,23787062-23787136,23787242-23787316,
           23787534-23787606,23787965-23788009,23788398-23788509,
           23788640-23788706,23789010-23789054,23790138-23790193,
           23790280-23790455,23790584-23790710,23791384-23791426
          Length = 298

 Score =  105 bits (252), Expect = 4e-23
 Identities = 45/85 (52%), Positives = 67/85 (78%)
 Frame = +3

Query: 255 SGKVNVTLRKPGSKLEHQGIKVELIGQIELFYDRGNHHEFISLVKELARPGDLLQHTSYP 434
           +G+V+V    PG ++EHQG+K+EL+GQIEL+++RG+ ++F SLV+EL   G++ +  +YP
Sbjct: 49  AGEVSVA-PVPGKRVEHQGVKIELLGQIELYHERGHFYDFTSLVRELEVAGEIYERKTYP 107

Query: 435 FEFANVEKPYEVYTGSNVRLRYFLR 509
           FEF+ VE PYE Y G+NVRLRY L+
Sbjct: 108 FEFSTVEMPYESYNGTNVRLRYILK 132



 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 45/63 (71%), Positives = 49/63 (77%)
 Frame = +2

Query: 530 TDITKEVDIAVHTLCSYPDVLNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLV 709
           T + +  D  V      P + NSIKMEVGIEDCLHIEFEY+KSKYHLKDVIVGKIYFLLV
Sbjct: 141 TSVVECRDFCVRNYTPLPSINNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIVGKIYFLLV 200

Query: 710 RIK 718
           RIK
Sbjct: 201 RIK 203



 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 133 FGQTADIEIVFDDADKRKVAEVKTDDGKKEKLLLYYDGETVPGK 264
           F    D+ I F D   RK   +K D+GK   +  +   ET+ G+
Sbjct: 8   FKAPCDVFITFADERSRKQVAIKKDNGKTLMVPAFQSLETIAGE 51


>03_05_0682 -
           26691973-26692623,26692681-26692788,26694741-26694807,
           26695311-26695422,26695743-26695787,26696163-26696235,
           26696321-26696362
          Length = 365

 Score =  103 bits (246), Expect = 2e-22
 Identities = 41/75 (54%), Positives = 61/75 (81%)
 Frame = +3

Query: 285 PGSKLEHQGIKVELIGQIELFYDRGNHHEFISLVKELARPGDLLQHTSYPFEFANVEKPY 464
           PG ++EHQG+K+EL+GQIEL+++RG+ ++F SLV+EL   G++ +  +YPFEF+ VE PY
Sbjct: 21  PGKRVEHQGVKIELLGQIELYHERGHFYDFTSLVRELDVAGEIYERKTYPFEFSTVEMPY 80

Query: 465 EVYTGSNVRLRYFLR 509
           + Y G+NVRLRY L+
Sbjct: 81  DSYNGTNVRLRYILK 95


>09_04_0397 + 17273013-17273570
          Length = 185

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -2

Query: 616 AYFHFDRIKDVRITTERVHGNIHLLGDVSEAPNDCR 509
           A+F FD+  D RI+ E V   +H LGD S +  DCR
Sbjct: 121 AFFVFDQDGDGRISAEEVMQVLHKLGD-SCSLEDCR 155


>02_05_0863 +
           32313890-32314132,32314227-32314517,32315157-32315493,
           32315944-32316278,32316763-32317010,32317296-32317881,
           32317970-32318083,32318165-32318287,32318325-32318531
          Length = 827

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = +1

Query: 67  KQNHVKNLLVE*LYIVKMSFFG----FGQTADIEIVFDDADKRKVAE 195
           KQ+H   LL   LYIV   F G    FG+  ++EI     D +  A+
Sbjct: 237 KQHHAAELLPTPLYIVYTQFLGQKEAFGENIEVEITGSTKDAQMFAQ 283


>02_05_0540 +
           29852109-29852195,29852304-29852477,29852585-29852841,
           29852954-29853125,29853513-29853551,29853647-29853715,
           29853795-29853911,29854190-29854401,29854578-29854736,
           29854810-29855009,29855100-29855266,29855346-29855442,
           29855560-29855651,29855861-29856139
          Length = 706

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 518 VRCLTDITKEVDIAVHTLCSYPDVLNSIKMEVGIEDCLHIE 640
           +R L ++  E +IA H   SYPD    I+ E  + + L+++
Sbjct: 53  LRGLNEVISEEEIAAHLSQSYPDADQEIEFESFLREYLNLQ 93


>07_03_1450 + 26620178-26620456,26622122-26622775
          Length = 310

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 256 EPFHRHNTTITFLFYHRPFSLQPPSVCQHHQKLFRYPPS 140
           +P+H H+       +  PFSL PP    HH  L +  P+
Sbjct: 137 QPYHHHH-------HLNPFSLPPPPPAYHHHHLIQEEPA 168


>01_06_0909 -
           32903520-32903828,32903899-32903973,32904068-32904235,
           32904508-32904565,32904638-32904879,32905145-32905216,
           32905865-32905943,32906734-32907062,32907137-32907256,
           32907355-32907429,32908260-32908342,32908942-32908984,
           32909271-32909429,32910203-32910281,32910685-32910755,
           32910847-32910946,32911023-32911229,32911348-32911442,
           32912362-32912436,32912621-32912713,32913078-32913182,
           32913851-32913921,32914943-32915096,32916035-32916098,
           32916717-32916800,32917543-32917589,32918352-32918411,
           32918521-32918592
          Length = 1062

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 20/87 (22%), Positives = 39/87 (44%)
 Frame = +1

Query: 295 NLNIKASRSNS*VRLNYSTTEVIITNSYLWLKN*RVRATCFNTRRILSSLLMSKNHTKYI 474
           N ++K +  +   R++ S  + +I N Y      +++      RR+L  +L+  ++T+  
Sbjct: 739 NSHLKLNGLSDLFRVSQSLADGVIPNEYGINAKQKLKIGSKIARRLLGKILIDLHNTRRE 798

Query: 475 QALMSGCGISCGDNRSVPH*HHQGGGY 555
            A   G   +C D   VP    +  GY
Sbjct: 799 VAAAGGESNACHDPTIVPSSKRKDRGY 825


>10_08_0858 -
           21108283-21108387,21108820-21108889,21109490-21109646,
           21109930-21110062,21110409-21110583,21113353-21113453,
           21113620-21113706,21115871-21115931,21116114-21116178,
           21116534-21117631
          Length = 683

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 261 KVNVTLRKPGSKLEHQGIKVELIGQ 335
           +V ++LRKP  K +H G  V+LI +
Sbjct: 609 QVQISLRKPNRKCKHSGQTVKLINE 633


>09_04_0475 -
           17913982-17914772,17914830-17915156,17915323-17915493,
           17915583-17915824,17915862-17916049,17916184-17916253,
           17916329-17916612
          Length = 690

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +3

Query: 357 GNHHEFISLVKELARPGDLLQHTSYPFEFANVEKPYEVYTGSNVRL--RYFLRRQSFGAS 530
           GNH + ISLV  L    +  +  +Y   +A+    +     SN+ L   +  +   FGAS
Sbjct: 454 GNHGQHISLVTRLRIAHESAEALAYLHSYASPPIIHGDVKSSNILLDVNFMAKVSDFGAS 513

Query: 531 LTSP 542
           + +P
Sbjct: 514 ILAP 517


>05_07_0192 - 28314224-28316287
          Length = 687

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/56 (30%), Positives = 22/56 (39%)
 Frame = +3

Query: 345 FYDRGNHHEFISLVKELARPGDLLQHTSYPFEFANVEKPYEVYTGSNVRLRYFLRR 512
           F DRG      S+V+ + R      H SY     +     EV  GS V  +   RR
Sbjct: 189 FLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRR 244


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,119,738
Number of Sequences: 37544
Number of extensions: 446741
Number of successful extensions: 1040
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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