BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021936 (746 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_0439 + 19096711-19096713,19096819-19096893,19097037-190971... 105 4e-23 11_06_0454 + 23786984-23786986,23787062-23787136,23787242-237873... 105 4e-23 03_05_0682 - 26691973-26692623,26692681-26692788,26694741-266948... 103 2e-22 09_04_0397 + 17273013-17273570 30 2.2 02_05_0863 + 32313890-32314132,32314227-32314517,32315157-323154... 29 3.9 02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 29 3.9 07_03_1450 + 26620178-26620456,26622122-26622775 28 6.9 01_06_0909 - 32903520-32903828,32903899-32903973,32904068-329042... 28 6.9 10_08_0858 - 21108283-21108387,21108820-21108889,21109490-211096... 28 9.1 09_04_0475 - 17913982-17914772,17914830-17915156,17915323-179154... 28 9.1 05_07_0192 - 28314224-28316287 28 9.1 >12_02_0439 + 19096711-19096713,19096819-19096893,19097037-19097111, 19097225-19097297,19097536-19097580,19098217-19098328, 19098794-19098866,19099178-19099222,19100216-19100271, 19100370-19100545,19101289-19101476 Length = 306 Score = 105 bits (252), Expect = 4e-23 Identities = 46/85 (54%), Positives = 66/85 (77%) Frame = +3 Query: 255 SGKVNVTLRKPGSKLEHQGIKVELIGQIELFYDRGNHHEFISLVKELARPGDLLQHTSYP 434 SG+V+V + PG ++EH G+K+EL+GQIEL+ +RG ++F SLV+EL PG++ + +YP Sbjct: 49 SGEVSV-VPVPGKRIEHLGVKIELLGQIELYLERGKFYDFTSLVRELDIPGEIYEKKTYP 107 Query: 435 FEFANVEKPYEVYTGSNVRLRYFLR 509 FEF+ VE PYE Y G+NVRLRY L+ Sbjct: 108 FEFSTVEMPYESYNGTNVRLRYILK 132 Score = 92.3 bits (219), Expect = 4e-19 Identities = 42/56 (75%), Positives = 46/56 (82%) Frame = +2 Query: 551 DIAVHTLCSYPDVLNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIK 718 + V P + NSIKMEVGIEDCLHIEFEY+KSKYHLKDVI+GKIYFLLVRIK Sbjct: 150 EFCVRNYSPAPTINNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIIGKIYFLLVRIK 205 Score = 33.1 bits (72), Expect = 0.24 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +1 Query: 133 FGQTADIEIVFDDADKRKVAEVKTDDGKKEKLLLYYDGETVPGK 264 F DI I F DA RK VK D+G+ + ++ ET+ G+ Sbjct: 8 FKPPCDISIAFSDARSRKQIAVKNDNGRTVMVPVFQSLETISGE 51 >11_06_0454 + 23786984-23786986,23787062-23787136,23787242-23787316, 23787534-23787606,23787965-23788009,23788398-23788509, 23788640-23788706,23789010-23789054,23790138-23790193, 23790280-23790455,23790584-23790710,23791384-23791426 Length = 298 Score = 105 bits (252), Expect = 4e-23 Identities = 45/85 (52%), Positives = 67/85 (78%) Frame = +3 Query: 255 SGKVNVTLRKPGSKLEHQGIKVELIGQIELFYDRGNHHEFISLVKELARPGDLLQHTSYP 434 +G+V+V PG ++EHQG+K+EL+GQIEL+++RG+ ++F SLV+EL G++ + +YP Sbjct: 49 AGEVSVA-PVPGKRVEHQGVKIELLGQIELYHERGHFYDFTSLVRELEVAGEIYERKTYP 107 Query: 435 FEFANVEKPYEVYTGSNVRLRYFLR 509 FEF+ VE PYE Y G+NVRLRY L+ Sbjct: 108 FEFSTVEMPYESYNGTNVRLRYILK 132 Score = 95.9 bits (228), Expect = 3e-20 Identities = 45/63 (71%), Positives = 49/63 (77%) Frame = +2 Query: 530 TDITKEVDIAVHTLCSYPDVLNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLV 709 T + + D V P + NSIKMEVGIEDCLHIEFEY+KSKYHLKDVIVGKIYFLLV Sbjct: 141 TSVVECRDFCVRNYTPLPSINNSIKMEVGIEDCLHIEFEYSKSKYHLKDVIVGKIYFLLV 200 Query: 710 RIK 718 RIK Sbjct: 201 RIK 203 Score = 28.3 bits (60), Expect = 6.9 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +1 Query: 133 FGQTADIEIVFDDADKRKVAEVKTDDGKKEKLLLYYDGETVPGK 264 F D+ I F D RK +K D+GK + + ET+ G+ Sbjct: 8 FKAPCDVFITFADERSRKQVAIKKDNGKTLMVPAFQSLETIAGE 51 >03_05_0682 - 26691973-26692623,26692681-26692788,26694741-26694807, 26695311-26695422,26695743-26695787,26696163-26696235, 26696321-26696362 Length = 365 Score = 103 bits (246), Expect = 2e-22 Identities = 41/75 (54%), Positives = 61/75 (81%) Frame = +3 Query: 285 PGSKLEHQGIKVELIGQIELFYDRGNHHEFISLVKELARPGDLLQHTSYPFEFANVEKPY 464 PG ++EHQG+K+EL+GQIEL+++RG+ ++F SLV+EL G++ + +YPFEF+ VE PY Sbjct: 21 PGKRVEHQGVKIELLGQIELYHERGHFYDFTSLVRELDVAGEIYERKTYPFEFSTVEMPY 80 Query: 465 EVYTGSNVRLRYFLR 509 + Y G+NVRLRY L+ Sbjct: 81 DSYNGTNVRLRYILK 95 >09_04_0397 + 17273013-17273570 Length = 185 Score = 29.9 bits (64), Expect = 2.2 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = -2 Query: 616 AYFHFDRIKDVRITTERVHGNIHLLGDVSEAPNDCR 509 A+F FD+ D RI+ E V +H LGD S + DCR Sbjct: 121 AFFVFDQDGDGRISAEEVMQVLHKLGD-SCSLEDCR 155 >02_05_0863 + 32313890-32314132,32314227-32314517,32315157-32315493, 32315944-32316278,32316763-32317010,32317296-32317881, 32317970-32318083,32318165-32318287,32318325-32318531 Length = 827 Score = 29.1 bits (62), Expect = 3.9 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = +1 Query: 67 KQNHVKNLLVE*LYIVKMSFFG----FGQTADIEIVFDDADKRKVAE 195 KQ+H LL LYIV F G FG+ ++EI D + A+ Sbjct: 237 KQHHAAELLPTPLYIVYTQFLGQKEAFGENIEVEITGSTKDAQMFAQ 283 >02_05_0540 + 29852109-29852195,29852304-29852477,29852585-29852841, 29852954-29853125,29853513-29853551,29853647-29853715, 29853795-29853911,29854190-29854401,29854578-29854736, 29854810-29855009,29855100-29855266,29855346-29855442, 29855560-29855651,29855861-29856139 Length = 706 Score = 29.1 bits (62), Expect = 3.9 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +2 Query: 518 VRCLTDITKEVDIAVHTLCSYPDVLNSIKMEVGIEDCLHIE 640 +R L ++ E +IA H SYPD I+ E + + L+++ Sbjct: 53 LRGLNEVISEEEIAAHLSQSYPDADQEIEFESFLREYLNLQ 93 >07_03_1450 + 26620178-26620456,26622122-26622775 Length = 310 Score = 28.3 bits (60), Expect = 6.9 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -2 Query: 256 EPFHRHNTTITFLFYHRPFSLQPPSVCQHHQKLFRYPPS 140 +P+H H+ + PFSL PP HH L + P+ Sbjct: 137 QPYHHHH-------HLNPFSLPPPPPAYHHHHLIQEEPA 168 >01_06_0909 - 32903520-32903828,32903899-32903973,32904068-32904235, 32904508-32904565,32904638-32904879,32905145-32905216, 32905865-32905943,32906734-32907062,32907137-32907256, 32907355-32907429,32908260-32908342,32908942-32908984, 32909271-32909429,32910203-32910281,32910685-32910755, 32910847-32910946,32911023-32911229,32911348-32911442, 32912362-32912436,32912621-32912713,32913078-32913182, 32913851-32913921,32914943-32915096,32916035-32916098, 32916717-32916800,32917543-32917589,32918352-32918411, 32918521-32918592 Length = 1062 Score = 28.3 bits (60), Expect = 6.9 Identities = 20/87 (22%), Positives = 39/87 (44%) Frame = +1 Query: 295 NLNIKASRSNS*VRLNYSTTEVIITNSYLWLKN*RVRATCFNTRRILSSLLMSKNHTKYI 474 N ++K + + R++ S + +I N Y +++ RR+L +L+ ++T+ Sbjct: 739 NSHLKLNGLSDLFRVSQSLADGVIPNEYGINAKQKLKIGSKIARRLLGKILIDLHNTRRE 798 Query: 475 QALMSGCGISCGDNRSVPH*HHQGGGY 555 A G +C D VP + GY Sbjct: 799 VAAAGGESNACHDPTIVPSSKRKDRGY 825 >10_08_0858 - 21108283-21108387,21108820-21108889,21109490-21109646, 21109930-21110062,21110409-21110583,21113353-21113453, 21113620-21113706,21115871-21115931,21116114-21116178, 21116534-21117631 Length = 683 Score = 27.9 bits (59), Expect = 9.1 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +3 Query: 261 KVNVTLRKPGSKLEHQGIKVELIGQ 335 +V ++LRKP K +H G V+LI + Sbjct: 609 QVQISLRKPNRKCKHSGQTVKLINE 633 >09_04_0475 - 17913982-17914772,17914830-17915156,17915323-17915493, 17915583-17915824,17915862-17916049,17916184-17916253, 17916329-17916612 Length = 690 Score = 27.9 bits (59), Expect = 9.1 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = +3 Query: 357 GNHHEFISLVKELARPGDLLQHTSYPFEFANVEKPYEVYTGSNVRL--RYFLRRQSFGAS 530 GNH + ISLV L + + +Y +A+ + SN+ L + + FGAS Sbjct: 454 GNHGQHISLVTRLRIAHESAEALAYLHSYASPPIIHGDVKSSNILLDVNFMAKVSDFGAS 513 Query: 531 LTSP 542 + +P Sbjct: 514 ILAP 517 >05_07_0192 - 28314224-28316287 Length = 687 Score = 27.9 bits (59), Expect = 9.1 Identities = 17/56 (30%), Positives = 22/56 (39%) Frame = +3 Query: 345 FYDRGNHHEFISLVKELARPGDLLQHTSYPFEFANVEKPYEVYTGSNVRLRYFLRR 512 F DRG S+V+ + R H SY + EV GS V + RR Sbjct: 189 FLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRR 244 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,119,738 Number of Sequences: 37544 Number of extensions: 446741 Number of successful extensions: 1040 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 994 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1040 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1980691104 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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