BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021936 (746 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_13044| Best HMM Match : Vps26 (HMM E-Value=0) 148 4e-36 SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) 33 0.19 SB_3591| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99 SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0 SB_52311| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0 SB_19291| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0 SB_664| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2 >SB_13044| Best HMM Match : Vps26 (HMM E-Value=0) Length = 669 Score = 148 bits (359), Expect = 4e-36 Identities = 65/85 (76%), Positives = 73/85 (85%) Frame = +3 Query: 255 SGKVNVTLRKPGSKLEHQGIKVELIGQIELFYDRGNHHEFISLVKELARPGDLLQHTSYP 434 +GKV++ L+ PG KLEHQGIK+E IGQIELFYDRGNHHEF SLV+ELARPG+L Q Y Sbjct: 46 TGKVHINLKNPGKKLEHQGIKIEFIGQIELFYDRGNHHEFTSLVRELARPGELTQSVCYD 105 Query: 435 FEFANVEKPYEVYTGSNVRLRYFLR 509 FEF NVEKPYE YTG+NVRLRYFLR Sbjct: 106 FEFVNVEKPYETYTGANVRLRYFLR 130 Score = 74.1 bits (174), Expect = 1e-13 Identities = 32/48 (66%), Positives = 39/48 (81%) Frame = +1 Query: 121 SFFGFGQTADIEIVFDDADKRKVAEVKTDDGKKEKLLLYYDGETVPGK 264 SFFGFGQTA++EI ADKRK +VK +DGKKE+L L+YDGE+V GK Sbjct: 1 SFFGFGQTAELEIALTGADKRKQVDVKNEDGKKERLFLFYDGESVTGK 48 Score = 65.3 bits (152), Expect = 5e-11 Identities = 39/73 (53%), Positives = 46/73 (63%) Frame = +2 Query: 500 FPAATIVRCLTDITKEVDIAVHTLCSYPDVLNSIKMEVGIEDCLHIEFEYNKSKYHLKDV 679 F TIVR L+D+TKE+D+AVHTL SYPD+ ++YHLKDV Sbjct: 128 FLRVTIVRRLSDVTKEMDLAVHTLSSYPDM---------------------NTRYHLKDV 166 Query: 680 IVGKIYFLLVRIK 718 IVGKIYFLLVRIK Sbjct: 167 IVGKIYFLLVRIK 179 >SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) Length = 1644 Score = 33.5 bits (73), Expect = 0.19 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = +3 Query: 468 VYTGSNVRLRYFLRRQSFGASLTSPRRWILPCTRSVVIRTSL 593 V+ S+VR+RY ++R F S S R W + +S+ IR ++ Sbjct: 569 VFAASSVRIRYAVKRSEFAYSAMSFRIWFVFSLQSICIRCAM 610 >SB_3591| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1585 Score = 31.1 bits (67), Expect = 0.99 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -2 Query: 274 VTFTFPEPFHRHNTTITFLFYHRPFSLQPPSVCQHHQKL 158 +T T+PE RH + T LF +P + QPP HQ+L Sbjct: 96 LTKTYPEL--RHGLSSTILFPLKPMTAQPPQPILAHQRL 132 >SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1257 Score = 29.1 bits (62), Expect = 4.0 Identities = 11/41 (26%), Positives = 23/41 (56%) Frame = +3 Query: 351 DRGNHHEFISLVKELARPGDLLQHTSYPFEFANVEKPYEVY 473 + GNH I + K+ + L H + P ++A++ +P+ V+ Sbjct: 630 ESGNHEVAIEIHKKPIKHSPFLVHVASPRDYASIARPFLVF 670 >SB_52311| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 506 Score = 29.1 bits (62), Expect = 4.0 Identities = 11/39 (28%), Positives = 20/39 (51%) Frame = -2 Query: 283 FRNVTFTFPEPFHRHNTTITFLFYHRPFSLQPPSVCQHH 167 + + T T P +H + TI ++H ++ PS C H+ Sbjct: 393 YNHNTITIPSQYHHNTNTIPSQYHHNTITI--PSQCHHN 429 >SB_19291| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1258 Score = 28.3 bits (60), Expect = 7.0 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +2 Query: 536 ITKEVDIAVHTLCSYPDVLNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRI 715 I E +A HT + + N I E + I +E NK+ H K V+ + L+R+ Sbjct: 476 ILNETKLA-HTPAHFDEDFNEIIKREEEESGVQISYEENKAAQHAKSVL--HLEIPLIRL 532 Query: 716 KN 721 KN Sbjct: 533 KN 534 >SB_664| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1046 Score = 27.9 bits (59), Expect = 9.2 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +2 Query: 470 IYRL*CQVAVFPAATIVRCLTDITKEVDIAVHTLCSYPDVL 592 I+ L C + + P+ T+ CL + VD+A + LCS DV+ Sbjct: 459 IHELQCLLQICPSPTLDICLIGMHPFVDLA-YLLCSREDVV 498 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,975,696 Number of Sequences: 59808 Number of extensions: 530466 Number of successful extensions: 1407 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1275 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1405 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2022185256 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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