Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021935
(743 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0875 + 32393496-32393881,32395297-32395397,32395493-323956... 95 4e-20
05_01_0108 - 709031-709204,709294-709359,709607-709714,709822-70... 37 0.015
02_05_0448 - 29100674-29100716,29100821-29100902,29101010-291011... 37 0.015
05_04_0447 + 21347786-21347974,21348104-21348169,21348266-213483... 36 0.026
01_06_1459 - 37515753-37515765,37516026-37516107,37516194-375163... 36 0.045
04_04_1663 - 35156098-35156140,35156273-35156354,35156506-351565... 33 0.18
06_01_0197 - 1525945-1526622 30 1.7
04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249... 30 1.7
02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702... 29 3.9
02_01_0791 - 5930553-5930802,5931042-5932351 29 5.2
11_06_0661 - 26009838-26010950,26011302-26011802 28 6.8
10_07_0142 - 13352315-13352357,13352536-13352617,13352717-133528... 28 6.8
08_02_1488 + 27485154-27485390,27485441-27485968 28 6.8
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 28 6.8
12_02_0271 + 16629099-16630325 28 9.0
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 28 9.0
03_02_0251 - 6821612-6823405,6823738-6823878 28 9.0
02_05_1094 + 34060262-34060385,34061256-34061428,34061505-340616... 28 9.0
>02_05_0875 +
32393496-32393881,32395297-32395397,32395493-32395674,
32396135-32396233,32396311-32396403
Length = 286
Score = 95.5 bits (227), Expect = 4e-20
Identities = 47/83 (56%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 TNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDT-G 439
++AKME++ E+ PIKQD KKGNLR+ +P+ WNYG PQTWE+P + D G
Sbjct: 101 SSAKMEVATDESFTPIKQDTKKGNLRY----YPYN-INWNYGLFPQTWEDPTLANTDVEG 155
Query: 440 ARGDNDPVDVIEIGERVASRGDV 508
A GDNDPVDV+EIGER A+ GDV
Sbjct: 156 AFGDNDPVDVVEIGERRANIGDV 178
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/67 (61%), Positives = 48/67 (71%)
Frame = +1
Query: 514 VKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPD 693
VK L LA+IDEGE DWK++AI DP A +NDV DVE FPG L A +WFR YK+PD
Sbjct: 181 VKPLAALAMIDEGELDWKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPD 240
Query: 694 GKPVNKF 714
GKP N+F
Sbjct: 241 GKPANRF 247
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 RSIARRLCAVKEPTRVTCSINSTATLKT-QVRMYIVEERGSPYTPDYRVFFKDEGG-PIS 188
R AR AV+ RV + +TA L+T ++R +E+G P T DYRVF D GG +S
Sbjct: 24 RRTARLPTAVRFQRRV---LATTALLRTAELRP---KEQGLPETLDYRVFLVDGGGRKVS 77
Query: 189 PMHDIPLWADKAQRLVNMVVEV 254
P HD+PL A + + VVE+
Sbjct: 78 PWHDVPLRA--GDGVFHFVVEI 97
>05_01_0108 -
709031-709204,709294-709359,709607-709714,709822-709887,
710125-710153,710239-710374
Length = 192
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +1
Query: 517 KILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDV 627
K +G + +ID+GE D K+IA+ + DP + ND++++
Sbjct: 125 KAIGLMPMIDQGEADDKIIAVCADDPEYKHYNDIKEL 161
>02_05_0448 -
29100674-29100716,29100821-29100902,29101010-29101130,
29101481-29101546,29101628-29101735,29102083-29102148,
29102605-29102633,29102773-29102902
Length = 214
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 517 KILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPDG 696
+ +G + +ID+GE D K+IA+ + DP D++++ P L+ +F YK +
Sbjct: 123 RAIGLMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEIP---PHRLQEIRRFFEDYKKNEN 179
Query: 697 KPV 705
K V
Sbjct: 180 KEV 182
>05_04_0447 +
21347786-21347974,21348104-21348169,21348266-21348373,
21348469-21348534,21348662-21348782,21348880-21348961,
21349052-21349094
Length = 224
Score = 36.3 bits (80), Expect = 0.026
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +1
Query: 517 KILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPDG 696
+ +G + +ID+GE D K+IA+ + DP N++ + L P L+ +F YK +
Sbjct: 133 RAIGLMPMIDQGEKDDKIIAVCADDPEYRHFNNLSE---LSPHRLQEIRRFFEDYKKNEN 189
Query: 697 KPV 705
K V
Sbjct: 190 KEV 192
>01_06_1459 -
37515753-37515765,37516026-37516107,37516194-37516314,
37516407-37516472,37516558-37516665,37516755-37516820,
37516920-37516948,37517095-37517221
Length = 203
Score = 35.5 bits (78), Expect = 0.045
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 517 KILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPDG 696
+ +G + +ID+GE D K+IA+ DP ND+ + L P ++ +F YK +
Sbjct: 122 RAIGLMPMIDQGEKDDKIIAVCVDDPEYRHYNDLSE---LSPHRVQEIRRFFEDYKKNEN 178
Query: 697 KPV 705
K V
Sbjct: 179 KEV 181
>04_04_1663 -
35156098-35156140,35156273-35156354,35156506-35156575,
35156682-35156747,35156976-35157083,35157328-35157393,
35158451-35158479,35158566-35158692
Length = 196
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 517 KILGTLALIDEGETDWKLIAIDSRDPNAEKLNDV 618
+ +G + +ID+GE D K+IA+ + DP ND+
Sbjct: 122 RAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 155
>06_01_0197 - 1525945-1526622
Length = 225
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 588 GPERGEVERCTR-RGDVVPWPPPRH 659
GP RG V R GD+VP PPP+H
Sbjct: 157 GPARGVVHLAVRVLGDLVPPPPPQH 181
>04_04_0779 -
28023735-28024058,28024520-28024618,28024704-28024940,
28025227-28025334,28025427-28025486,28025813-28025888,
28025984-28026144,28026374-28026436,28026543-28026630,
28026872-28027612,28027695-28028239
Length = 833
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 510 VTSPRLATRSPISMTSTGSLSPLAPVSG 427
+ SPR+ + P S +GS+SPL P SG
Sbjct: 318 IPSPRMTSPGPSSRVHSGSVSPLHPRSG 345
>02_05_0235 -
27068516-27069032,27069697-27069788,27070056-27070289,
27071569-27071676,27071796-27071855,27072368-27072443,
27072550-27072710,27076919-27076981,27077061-27077148,
27077568-27078308,27078406-27079033,27079314-27079368,
27082073-27083527
Length = 1425
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 510 VTSPRLATRSPISMTSTGSLSPLAPVSG 427
+ SPR+ + P S +GS+SPL P +G
Sbjct: 850 IPSPRMTSPGPSSRVHSGSVSPLHPRAG 877
>02_01_0791 - 5930553-5930802,5931042-5932351
Length = 519
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 377 RCSRDEGRRCSRTEGCLS 324
RCSRD RCSR GC +
Sbjct: 118 RCSRDAFMRCSRLAGCFT 135
>11_06_0661 - 26009838-26010950,26011302-26011802
Length = 537
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 308 IKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARG 448
I +D+K N+ N P + ++G L TWE P H D G G
Sbjct: 341 IHRDIKPSNILLDGNWVPR---LTDFG-LALTWEGPGHEDTVVGTYG 383
>10_07_0142 -
13352315-13352357,13352536-13352617,13352717-13352837,
13353089-13353196,13353317-13353382,13353480-13353547,
13353603-13353702
Length = 195
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 547 EGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPDGKPV 705
+GE D K+IA+ DP ND+++ L P L +F YK + K V
Sbjct: 114 QGEKDDKIIAVCVDDPEFRHFNDLKE---LSPHRLAEIRRFFEDYKKNENKEV 163
>08_02_1488 + 27485154-27485390,27485441-27485968
Length = 254
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 627 GDVVPWPPPRHRRMVQTLQSSGRQAGEQV 713
GD+ P+P P HRR S GR G ++
Sbjct: 192 GDLAPFPFPHHRRRKGRAPSEGRAYGPRL 220
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 528 TEDLYGVTSPRLATRSPISMTSTGSLSPLAPVSGST 421
T +Y TSP + SPI ++ S SP +PV T
Sbjct: 1644 TSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPT 1679
>12_02_0271 + 16629099-16630325
Length = 408
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 529 TLALIDEGETDWKLIAIDSRDPNAEKLND 615
T +L+D+GE DW ++ + +D KL D
Sbjct: 356 TYSLVDDGEDDW-VVMVKKQDRQVYKLRD 383
>09_04_0042 -
14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 404 WENPNHVDPDTGARGDNDPVDVIEI 478
W+ N V PDT G DP D ++I
Sbjct: 282 WQAANFVKPDTKKGGSMDPSDYVKI 306
>03_02_0251 - 6821612-6823405,6823738-6823878
Length = 644
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 510 VTSPRLATRSPISMTSTGSLSPLAPVSGST*LGFSQVCG 394
VT + +R+ ISM G L LA GS LGF+ + G
Sbjct: 64 VTGLVMYSRALISMLFLGRLGELALAGGSLALGFANITG 102
>02_05_1094 +
34060262-34060385,34061256-34061428,34061505-34061686,
34061789-34062073,34062160-34062218,34062349-34062385,
34062485-34062556,34063613-34063937,34064027-34064410
Length = 546
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/68 (25%), Positives = 24/68 (35%)
Frame = +3
Query: 81 TATLKTQVRMYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVLD 260
T L V I + P F+ ++ GP+ P P AD R LD
Sbjct: 356 TYQLVNLVNQVITNVSNGNFPPQTPFFYFNQSGPLMPTLCNPFTADLNNRTCTRGEVTLD 415
Query: 261 GPMRKWRS 284
R W++
Sbjct: 416 NATRVWKN 423
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,923,439
Number of Sequences: 37544
Number of extensions: 459245
Number of successful extensions: 1455
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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