Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021935
(743 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical pr... 149 2e-36
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 149 2e-36
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 149 2e-36
Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical pr... 149 2e-36
AC024810-11|AAK68516.2| 165|Caenorhabditis elegans Hypothetical... 32 0.37
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 28 6.1
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 28 6.1
>Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical
protein C47E12.4d protein.
Length = 292
Score = 149 bits (361), Expect = 2e-36
Identities = 62/84 (73%), Positives = 73/84 (86%)
Frame = +2
Query: 257 RWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDT 436
RWTNAKME++ E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDT
Sbjct: 60 RWTNAKMEMATKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDT 119
Query: 437 GARGDNDPVDVIEIGERVASRGDV 508
GA+GDNDP+DVIE+G +VA RG V
Sbjct: 120 GAKGDNDPIDVIEVGSKVAGRGAV 143
Score = 127 bits (307), Expect = 7e-30
Identities = 55/75 (73%), Positives = 65/75 (86%)
Frame = +1
Query: 514 VKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPD 693
VK+LGTLALIDEGETDWKL+AID D NA+KLND+ DVE ++PGLL A+VEWFR YK+P
Sbjct: 146 VKVLGTLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPGLLAASVEWFRNYKIPA 205
Query: 694 GKPVNKFAFDGELKN 738
GKP N+FAF+GE KN
Sbjct: 206 GKPANEFAFNGEFKN 220
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = +3
Query: 108 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVLDGPMRKWRSA 287
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+ K A
Sbjct: 10 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 69
Query: 288 SGRP 299
+ P
Sbjct: 70 TKEP 73
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 149 bits (361), Expect = 2e-36
Identities = 62/84 (73%), Positives = 73/84 (86%)
Frame = +2
Query: 257 RWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDT 436
RWTNAKME++ E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDT
Sbjct: 174 RWTNAKMEMATKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDT 233
Query: 437 GARGDNDPVDVIEIGERVASRGDV 508
GA+GDNDP+DVIE+G +VA RG V
Sbjct: 234 GAKGDNDPIDVIEVGSKVAGRGAV 257
Score = 127 bits (307), Expect = 7e-30
Identities = 55/75 (73%), Positives = 65/75 (86%)
Frame = +1
Query: 514 VKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPD 693
VK+LGTLALIDEGETDWKL+AID D NA+KLND+ DVE ++PGLL A+VEWFR YK+P
Sbjct: 260 VKVLGTLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPGLLAASVEWFRNYKIPA 319
Query: 694 GKPVNKFAFDGELKN 738
GKP N+FAF+GE KN
Sbjct: 320 GKPANEFAFNGEFKN 334
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = +3
Query: 108 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVLDGPMRKWRSA 287
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+ K A
Sbjct: 124 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 183
Query: 288 SGRP 299
+ P
Sbjct: 184 TKEP 187
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 149 bits (361), Expect = 2e-36
Identities = 62/84 (73%), Positives = 73/84 (86%)
Frame = +2
Query: 257 RWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDT 436
RWTNAKME++ E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDT
Sbjct: 175 RWTNAKMEMATKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDT 234
Query: 437 GARGDNDPVDVIEIGERVASRGDV 508
GA+GDNDP+DVIE+G +VA RG V
Sbjct: 235 GAKGDNDPIDVIEVGSKVAGRGAV 258
Score = 127 bits (307), Expect = 7e-30
Identities = 55/75 (73%), Positives = 65/75 (86%)
Frame = +1
Query: 514 VKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPD 693
VK+LGTLALIDEGETDWKL+AID D NA+KLND+ DVE ++PGLL A+VEWFR YK+P
Sbjct: 261 VKVLGTLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPGLLAASVEWFRNYKIPA 320
Query: 694 GKPVNKFAFDGELKN 738
GKP N+FAF+GE KN
Sbjct: 321 GKPANEFAFNGEFKN 335
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = +3
Query: 108 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVLDGPMRKWRSA 287
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+ K A
Sbjct: 125 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 184
Query: 288 SGRP 299
+ P
Sbjct: 185 TKEP 188
>Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical
protein C47E12.4a protein.
Length = 338
Score = 149 bits (361), Expect = 2e-36
Identities = 62/84 (73%), Positives = 73/84 (86%)
Frame = +2
Query: 257 RWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDT 436
RWTNAKME++ E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDT
Sbjct: 106 RWTNAKMEMATKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDT 165
Query: 437 GARGDNDPVDVIEIGERVASRGDV 508
GA+GDNDP+DVIE+G +VA RG V
Sbjct: 166 GAKGDNDPIDVIEVGSKVAGRGAV 189
Score = 127 bits (307), Expect = 7e-30
Identities = 55/75 (73%), Positives = 65/75 (86%)
Frame = +1
Query: 514 VKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPGLLRATVEWFRLYKVPD 693
VK+LGTLALIDEGETDWKL+AID D NA+KLND+ DVE ++PGLL A+VEWFR YK+P
Sbjct: 192 VKVLGTLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPGLLAASVEWFRNYKIPA 251
Query: 694 GKPVNKFAFDGELKN 738
GKP N+FAF+GE KN
Sbjct: 252 GKPANEFAFNGEFKN 266
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = +3
Query: 108 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVLDGPMRKWRSA 287
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+ K A
Sbjct: 56 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 115
Query: 288 SGRP 299
+ P
Sbjct: 116 TKEP 119
>AC024810-11|AAK68516.2| 165|Caenorhabditis elegans Hypothetical
protein Y54E10A.17 protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = -1
Query: 695 PSGTL*SLNHST---VAR-RRPGNNVSTSCTSFNFSAFGSRESIAISFQSVSPSSM 540
PS TL SL++++ VAR RP ++ST CT++NF GS E +I + + +P ++
Sbjct: 98 PSVTLQSLDYNSNTLVARFARPVGSLST-CTTWNFVTEGSIEDGSIGYHNAAPHTV 152
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 350 NVFPHRGYIWNYGALPQTWE-NPNHVDPD 433
N +P GYIWNY Q WE +P++V P+
Sbjct: 401 NAYP--GYIWNYET--QEWEYDPSYVAPE 425
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 271 ENGDQPRGGPQSYQAGRKERQPSVREQRLPSSRLHLELR 387
+N D GGP + + GRK++ S E S LH EL+
Sbjct: 83 KNSDGGAGGPPA-KRGRKKKAKSESEDEAESDHLHDELK 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,844,705
Number of Sequences: 27780
Number of extensions: 362557
Number of successful extensions: 1005
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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