BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021935 (743 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 26 0.32 DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 3.0 DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 3.0 AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.2 >AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase protein. Length = 1143 Score = 26.2 bits (55), Expect = 0.32 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 8/50 (16%) Frame = +2 Query: 293 EAL-NPIKQDVKKGNLRFVNNVFPHR-----GY-IWNYGALPQT-WENPN 418 EAL N IK KGN+R +FP R Y +WN+ + ++NP+ Sbjct: 151 EALCNHIKYSTNKGNIRSAITIFPQRTDGKHDYRVWNHQLISYAGYKNPD 200 >DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor protein. Length = 405 Score = 23.0 bits (47), Expect = 3.0 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -3 Query: 351 LFTNRRLPFFTSCLIGLRASPRLISIFALVHLVLLLPC*RGVELCRPIVECRAW 190 + T RRL T+C + A+ L+ A++ +LL G P++ C +W Sbjct: 62 VITTRRLRSVTNCFVSSLAAADLLVGLAVMPPAVLLQLTGGTWELGPML-CDSW 114 >DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine receptor alpha1subunit protein. Length = 601 Score = 23.0 bits (47), Expect = 3.0 Identities = 13/42 (30%), Positives = 18/42 (42%) Frame = +2 Query: 386 GALPQTWENPNHVDPDTGARGDNDPVDVIEIGERVASRGDVT 511 GA+ E VD D GD+D D +E + G +T Sbjct: 377 GAMNANGEAVGEVDEDDDDDGDDDDDDDVEAANGKPAEGMLT 418 >AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein protein. Length = 1308 Score = 21.4 bits (43), Expect = 9.2 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +3 Query: 171 EGGPISPMHDIPLWADKAQRLVNMVVEVLDGPM 269 +G PISP++D A LV + + L G + Sbjct: 423 QGNPISPLNDWYSLASSWPALVPLALGFLAGEL 455 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 202,382 Number of Sequences: 438 Number of extensions: 4199 Number of successful extensions: 23 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 23 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23266665 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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