Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021934
(680 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 93 1e-19
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 93 1e-19
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 93 1e-19
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 90 2e-18
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 90 2e-18
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 52 1e-10
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 60 2e-09
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 49 4e-06
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 49 4e-06
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 49 4e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 49 4e-06
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 49 4e-06
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 49 4e-06
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 49 4e-06
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 49 4e-06
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 49 4e-06
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_54043| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.093
SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27) 29 3.5
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 28 6.1
SB_3590| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 330 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 371
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/42 (90%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+M+DL++EYQQYQ
Sbjct: 150 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQ 191
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/42 (90%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+M+DL++EYQQYQ
Sbjct: 212 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQ 253
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 52.4 bits (120), Expect(2) = 1e-10
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTE 601
F AMFRR+AFLHWYT EGMD +EFTE
Sbjct: 204 FAAMFRRRAFLHWYTTEGMDPLEFTE 229
Score = 31.5 bits (68), Expect(2) = 1e-10
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = -3
Query: 609 FTEAESHMNDLVSEYQQYQ 553
+ A+S++NDL+SEYQQY+
Sbjct: 256 YFSADSNLNDLISEYQQYE 274
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
+ MFRR+AFLHWYT EGMD +F EA++ + DL+S YQQ
Sbjct: 290 YKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQ 329
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 193 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 379 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 93 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 132
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 547 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 586
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 332 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 371
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 766 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 1175 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1214
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 380 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 811 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 850
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 360 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 399
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 828 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 867
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 980 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1019
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 320 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 359
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 193 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 308 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 347
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 45.2 bits (102), Expect = 5e-05
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = -3
Query: 666 FRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48
>SB_54043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 34.3 bits (75), Expect = 0.093
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 474 SSERT*LSSISCPAPRQT-LRPRRRWPPGTVGTRRQGRSCGSQ 599
S E LSS+ C + L RR W T TR +GRS GSQ
Sbjct: 122 SEENKRLSSVKCAFDKSNKLENRRHWQRKTPNTREEGRSKGSQ 164
>SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27)
Length = 309
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 581 SFMWLSASVNSISSMPSPVYQCKKALRLNIAVN 679
S WLS N +SS+PS ++ K L++ +N
Sbjct: 184 SLQWLSLRENHLSSLPSEFFKLPKLAHLDLNMN 216
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTG-EGMDEMEFTEAESHMNDLVSEY 565
F +++RKA +H YT +G++ +F + ++ L+ EY
Sbjct: 432 FMKLYKRKAHVHHYTHVDGLEVGQFDDGLESLSWLIQEY 470
>SB_3590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 96 WLQNEELKLHLRYQNQVQPYK 158
++QN +LK+HLR + +PYK
Sbjct: 115 FIQNADLKIHLRIHSGQKPYK 135
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 96 WLQNEELKLHLRYQNQVQPYK 158
++QN +LK+HLR + +PYK
Sbjct: 171 FIQNADLKIHLRIHSGQKPYK 191
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,967,089
Number of Sequences: 59808
Number of extensions: 309416
Number of successful extensions: 844
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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