Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021934
(680 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 93 2e-19
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 93 2e-19
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 93 2e-19
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 93 2e-19
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 93 2e-19
AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD... 93 2e-19
AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC... 93 2e-19
AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA... 93 2e-19
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 93 2e-19
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 93 3e-19
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 93 3e-19
X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubul... 92 7e-19
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 92 7e-19
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 92 7e-19
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 92 7e-19
AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p pro... 53 4e-07
AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-P... 53 4e-07
M14646-1|AAA28988.1| 462|Drosophila melanogaster protein ( D.me... 51 2e-06
AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA... 51 2e-06
M14645-1|AAA28987.1| 450|Drosophila melanogaster protein ( D.me... 49 7e-06
M14643-1|AAA28985.1| 450|Drosophila melanogaster protein ( D.me... 49 7e-06
BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p pro... 49 7e-06
BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p pro... 49 7e-06
BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p pro... 49 7e-06
AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p pro... 49 7e-06
AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,... 49 7e-06
AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,... 49 7e-06
AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA ... 49 7e-06
M14644-1|AAA28986.1| 449|Drosophila melanogaster protein ( D.me... 48 9e-06
AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p pro... 48 9e-06
AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA... 48 9e-06
AY089253-1|AAL89991.1| 455|Drosophila melanogaster AT04270p pro... 40 0.004
AE014297-2432|AAF55488.1| 455|Drosophila melanogaster CG7794-PA... 40 0.004
AE014297-420|AAF51901.1| 274|Drosophila melanogaster CG15591-PA... 29 4.5
X99211-1|CAA67601.1| 898|Drosophila melanogaster ubiquitin-spec... 29 5.9
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD,
isoform D protein.
Length = 375
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 313 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 354
>AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC,
isoform C protein.
Length = 375
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 313 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 354
>AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA,
isoform A protein.
Length = 456
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 394 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 435
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 93.1 bits (221), Expect = 3e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDL+SEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQ 426
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 93.1 bits (221), Expect = 3e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDL+SEYQQYQ
Sbjct: 450 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQ 491
>X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubulin
protein.
Length = 435
Score = 91.9 bits (218), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
F+AMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 372 FSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 413
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 91.9 bits (218), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
F+AMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 391 FSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 432
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 91.9 bits (218), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
F+AMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 391 FSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 432
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 91.9 bits (218), Expect = 7e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
F+AMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 391 FSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 432
>AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p
protein.
Length = 462
Score = 52.8 bits (121), Expect = 4e-07
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = -3
Query: 672 AMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQ 562
+M RRKA LHWYTGEGM+E EF +A+ + ++ +Y+
Sbjct: 386 SMLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYR 422
>AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-PA
protein.
Length = 462
Score = 52.8 bits (121), Expect = 4e-07
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = -3
Query: 672 AMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQ 562
+M RRKA LHWYTGEGM+E EF +A+ + ++ +Y+
Sbjct: 386 SMLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYR 422
>M14646-1|AAA28988.1| 462|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-4), complete
cds. ).
Length = 462
Score = 50.8 bits (116), Expect = 2e-06
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F MF+++AF+HWY GEGM+E EFTEA ++ L ++++
Sbjct: 406 FDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEE 445
>AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA
protein.
Length = 462
Score = 50.8 bits (116), Expect = 2e-06
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F MF+++AF+HWY GEGM+E EFTEA ++ L ++++
Sbjct: 406 FDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEE 445
>M14645-1|AAA28987.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-3), complete
cds. ).
Length = 450
Score = 48.8 bits (111), Expect = 7e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>M14643-1|AAA28985.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-1), complete
cds. ).
Length = 450
Score = 48.8 bits (111), Expect = 7e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p
protein.
Length = 450
Score = 48.8 bits (111), Expect = 7e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p
protein.
Length = 450
Score = 48.8 bits (111), Expect = 7e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p
protein.
Length = 450
Score = 48.8 bits (111), Expect = 7e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p
protein.
Length = 450
Score = 48.8 bits (111), Expect = 7e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,
isoform B protein.
Length = 450
Score = 48.8 bits (111), Expect = 7e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,
isoform A protein.
Length = 450
Score = 48.8 bits (111), Expect = 7e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA
protein.
Length = 450
Score = 48.8 bits (111), Expect = 7e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>M14644-1|AAA28986.1| 449|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-2), complete
cds. ).
Length = 449
Score = 48.4 bits (110), Expect = 9e-06
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEE 434
>AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p
protein.
Length = 449
Score = 48.4 bits (110), Expect = 9e-06
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEE 434
>AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA
protein.
Length = 449
Score = 48.4 bits (110), Expect = 9e-06
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEE 434
>AY089253-1|AAL89991.1| 455|Drosophila melanogaster AT04270p
protein.
Length = 455
Score = 39.5 bits (88), Expect = 0.004
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEY 565
F +++R+AF++ Y GEG++E F EA ++ LV +Y
Sbjct: 396 FDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDY 433
>AE014297-2432|AAF55488.1| 455|Drosophila melanogaster CG7794-PA
protein.
Length = 455
Score = 39.5 bits (88), Expect = 0.004
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEY 565
F +++R+AF++ Y GEG++E F EA ++ LV +Y
Sbjct: 396 FDKLYQRRAFVYHYVGEGLEEGNFNEASENICQLVHDY 433
>AE014297-420|AAF51901.1| 274|Drosophila melanogaster CG15591-PA
protein.
Length = 274
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 557 YCWYSETRSFMWLSASVNSISSMPSPVYQ 643
+CW S RS + + NS+SS P P Q
Sbjct: 15 FCWLSSARSASYQHQNPNSLSSAPRPQVQ 43
>X99211-1|CAA67601.1| 898|Drosophila melanogaster
ubiquitin-specific protease protein.
Length = 898
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = +3
Query: 504 SCPAPRQTLRP---RRRWPPGTVGTRRQGRSC 590
SCP P Q LR RR W G VG Q +C
Sbjct: 33 SCPRPPQKLRQRQGRRAWSRGYVGLVNQAMTC 64
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,602,842
Number of Sequences: 53049
Number of extensions: 445436
Number of successful extensions: 1226
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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