Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021934
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 93 1e-19
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 93 1e-19
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 93 1e-19
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 93 1e-19
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 93 2e-19
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 64 1e-10
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 64 1e-10
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 50 1e-06
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 50 1e-06
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 50 1e-06
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 50 1e-06
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 50 1e-06
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 50 2e-06
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 49 4e-06
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 49 4e-06
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 49 4e-06
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 49 4e-06
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 49 4e-06
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 49 4e-06
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 4.1
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDLVSEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDL+SEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQ 426
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
FTAMFRRKAFLHWYTGEGMDEMEFTEAES+MNDL+SEYQQYQ
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQ 426
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
F +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY+
Sbjct: 383 FAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYE 421
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQYQ 553
F +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY+
Sbjct: 383 FAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYE 421
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EFTEA + L +Y++
Sbjct: 393 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EFTEA + L +Y++
Sbjct: 393 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EFTEA + L +Y++
Sbjct: 393 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EFTEA + L +Y++
Sbjct: 393 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EFTEA + L +Y++
Sbjct: 393 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EFTEA + L +Y++
Sbjct: 393 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EFTEA + L +Y++
Sbjct: 30 FDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA M L +Y++
Sbjct: 401 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA M L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA M L +Y++
Sbjct: 373 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 390 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 400 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 394 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HWY GEGM+E EF+EA + L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -3
Query: 678 FTAMFRRKAFLHWYTGEGMDEMEFTEAESHMNDLVSEYQQ 559
F M+ ++AF+HW+ GEGM+E EF EA + L +Y +
Sbjct: 398 FDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAE 437
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 133 YLRCNFSSSFCNQCDELLAFSNE 65
YLRC++ +S QC E FSN+
Sbjct: 1126 YLRCSYGASKLQQCSEDRVFSND 1148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,281,950
Number of Sequences: 27780
Number of extensions: 233354
Number of successful extensions: 604
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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