Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021933
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 403 FCSELTCVFIKGNYLYFVVVFLNK 332
           FC  + C+ + GN +  +V+F  K
Sbjct: 74  FCIIIMCLGVIGNVMVPIVIFKTK 97


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 403 FCSELTCVFIKGNYLYFVVVFLNK 332
           FC  + C+ + GN +  +V+F  K
Sbjct: 74  FCIIIMCLGVIGNVMVPIVIFKTK 97


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 467 YPDLLATSGDYLRIGVPESR 526
           YPD+       L+I +PESR
Sbjct: 93  YPDIFMREEVALKINLPESR 112


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -1

Query: 133 LLCLI*IYL-FKY*TVHELLYLQLMYFII 50
           LLC+   Y  F   TVH L  L + YF++
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYFVV 138


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 455 SKGVYPDLLATSGDYLRIGVPESR 526
           +K  YPD+       ++I +PESR
Sbjct: 147 AKTRYPDIFMREEVAVKINLPESR 170


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/42 (19%), Positives = 19/42 (45%)
 Frame = -3

Query: 695 SWTCPRPVQSPSPRWCSRVNTTGANEVRIHSFQSKDVRGAQK 570
           +W    P   P+P     + +   N   + S  ++++RG ++
Sbjct: 65  AWQANSPPSPPAPSELPALKSRKLNNNNVVSSTNQEIRGPKR 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,838
Number of Sequences: 336
Number of extensions: 4250
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)