Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021933
         (697 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U94747-1|AAC18913.1|  342|Homo sapiens HAN11 protein.                 173   4e-43
BC001264-1|AAH01264.1|  342|Homo sapiens WDR68 protein protein.       173   4e-43

>U94747-1|AAC18913.1|  342|Homo sapiens HAN11 protein.
          Length = 342

 Score =  173 bits (422), Expect = 4e-43
 Identities = 92/153 (60%), Positives = 110/153 (71%), Gaps = 9/153 (5%)
 Frame = +2

Query: 257 QAPWPLYSMNWSVRPDKSFRLALGSFVEEYNNKVQIISLDEDTSEFTAKSTFDHPYPTTK 436
           +APW +Y+MNWSVRPDK FRLALGSFVEEYNNKVQ++ LDE++SEF  ++TFDHPYPTTK
Sbjct: 14  EAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFDHPYPTTK 73

Query: 437 IMWIPDSKGVYPDLLATSGDYL---RIGVPESRTH---YSNVS*IIIRILTSV--LLLHP 592
           +MWIPD+KGVYPDLLATSGDYL   R+G  E+R      +N +      LTS     + P
Sbjct: 74  LMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSFDWNEVDP 133

Query: 593 -LIGTNGS*PHWHQ*Y*HDCTIWGLETGQVLGR 688
            L+GT+             CTIWGLETGQVLGR
Sbjct: 134 YLLGTSS--------IDTTCTIWGLETGQVLGR 158



 Score = 63.3 bits (147), Expect = 8e-10
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = +1

Query: 511 RAGEPYTLFECVLNNNKNSDFCAPLTSFDWNE 606
           R GE  T  EC+LNNNKNSDFCAPLTSFDWNE
Sbjct: 99  RVGETETRLECLLNNNKNSDFCAPLTSFDWNE 130


>BC001264-1|AAH01264.1|  342|Homo sapiens WDR68 protein protein.
          Length = 342

 Score =  173 bits (422), Expect = 4e-43
 Identities = 92/153 (60%), Positives = 110/153 (71%), Gaps = 9/153 (5%)
 Frame = +2

Query: 257 QAPWPLYSMNWSVRPDKSFRLALGSFVEEYNNKVQIISLDEDTSEFTAKSTFDHPYPTTK 436
           +APW +Y+MNWSVRPDK FRLALGSFVEEYNNKVQ++ LDE++SEF  ++TFDHPYPTTK
Sbjct: 14  EAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFDHPYPTTK 73

Query: 437 IMWIPDSKGVYPDLLATSGDYL---RIGVPESRTH---YSNVS*IIIRILTSV--LLLHP 592
           +MWIPD+KGVYPDLLATSGDYL   R+G  E+R      +N +      LTS     + P
Sbjct: 74  LMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSFDWNEVDP 133

Query: 593 -LIGTNGS*PHWHQ*Y*HDCTIWGLETGQVLGR 688
            L+GT+             CTIWGLETGQVLGR
Sbjct: 134 YLLGTSS--------IDTTCTIWGLETGQVLGR 158



 Score = 63.3 bits (147), Expect = 8e-10
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = +1

Query: 511 RAGEPYTLFECVLNNNKNSDFCAPLTSFDWNE 606
           R GE  T  EC+LNNNKNSDFCAPLTSFDWNE
Sbjct: 99  RVGETETRLECLLNNNKNSDFCAPLTSFDWNE 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,613,997
Number of Sequences: 237096
Number of extensions: 2537649
Number of successful extensions: 9309
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9309
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)