Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021933
         (697 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3173|AAF50953.2|  343|Drosophila melanogaster CG14614-P...   186   3e-47
M61229-2|AAA28686.1| 1962|Drosophila melanogaster myosin heavy c...    32   0.86 
M61229-1|AAA28687.1| 1962|Drosophila melanogaster myosin heavy c...    32   0.86 
AE014134-2779|AAN10970.1| 1936|Drosophila melanogaster CG17927-P...    32   0.86 
AE014134-2778|AAN10969.1| 1936|Drosophila melanogaster CG17927-P...    32   0.86 
AE014134-2777|AAN10968.1| 1936|Drosophila melanogaster CG17927-P...    32   0.86 
AE014134-2776|AAN10967.1| 1962|Drosophila melanogaster CG17927-P...    32   0.86 
AE014134-2775|AAN10966.1| 1962|Drosophila melanogaster CG17927-P...    32   0.86 
AE014134-2774|AAN10965.1| 1962|Drosophila melanogaster CG17927-P...    32   0.86 
AE014134-2773|AAN10964.1| 1962|Drosophila melanogaster CG17927-P...    32   0.86 
AE014134-2772|AAN10963.1| 1962|Drosophila melanogaster CG17927-P...    32   0.86 
AE014134-2771|AAN10962.1| 1962|Drosophila melanogaster CG17927-P...    32   0.86 
AE013599-2920|AAF57538.1|  567|Drosophila melanogaster CG15122-P...    31   1.1  
AE014134-2770|AAF53566.3| 1960|Drosophila melanogaster CG17927-P...    31   1.5  
AE014134-2769|AAN10961.1| 1962|Drosophila melanogaster CG17927-P...    31   1.5  
AE014134-2768|AAN10960.1| 1962|Drosophila melanogaster CG17927-P...    31   1.5  
AE014134-2767|AAN10959.1| 1962|Drosophila melanogaster CG17927-P...    31   1.5  
J02788-2|AAA28707.1|  264|Drosophila melanogaster protein ( D.me...    31   2.0  
J02788-1|AAA28706.1|  264|Drosophila melanogaster protein ( D.me...    29   6.0  
AE014297-4492|AAF56978.3| 3731|Drosophila melanogaster CG15523-P...    29   6.0  

>AE014298-3173|AAF50953.2|  343|Drosophila melanogaster CG14614-PA
           protein.
          Length = 343

 Score =  186 bits (452), Expect = 3e-47
 Identities = 100/148 (67%), Positives = 110/148 (74%), Gaps = 9/148 (6%)
 Frame = +2

Query: 260 APWPLYSMNWSVRPDKSFRLALGSFVEEYNNKVQIISLDEDTSEFTAKSTFDHPYPTTKI 439
           APWPLYSMNWSVRPDK FRLALGSF+EEYNNKVQIISLDEDTSEF+AKSTFDHPYPTTKI
Sbjct: 16  APWPLYSMNWSVRPDKRFRLALGSFIEEYNNKVQIISLDEDTSEFSAKSTFDHPYPTTKI 75

Query: 440 MWIPDSKGVYPDLLATSGDYLRI---GVPESRTH---YSNVS*IIIRILTSV--LLLHP- 592
           MWIPDSKGVYPDLLATSGDYLR+   G P++R      +N +      LTS     + P 
Sbjct: 76  MWIPDSKGVYPDLLATSGDYLRVWRAGEPDTRLECVLNNNKNSDFCAPLTSFDWNEVDPN 135

Query: 593 LIGTNGS*PHWHQ*Y*HDCTIWGLETGQ 676
           L+GT+             CTIWGLETGQ
Sbjct: 136 LVGTSS--------IDTTCTIWGLETGQ 155



 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 29/32 (90%), Positives = 29/32 (90%)
 Frame = +1

Query: 511 RAGEPYTLFECVLNNNKNSDFCAPLTSFDWNE 606
           RAGEP T  ECVLNNNKNSDFCAPLTSFDWNE
Sbjct: 100 RAGEPDTRLECVLNNNKNSDFCAPLTSFDWNE 131



 Score = 30.7 bits (66), Expect = 2.0
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = +3

Query: 606 MDPNLIGTSSIDTT 647
           +DPNL+GTSSIDTT
Sbjct: 132 VDPNLVGTSSIDTT 145


>M61229-2|AAA28686.1| 1962|Drosophila melanogaster myosin heavy
           chain protein.
          Length = 1962

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGVPESRT 529
           PY + K  WIPD K  Y   ++ AT GD + +G+    T
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGET 69


>M61229-1|AAA28687.1| 1962|Drosophila melanogaster myosin heavy
           chain protein.
          Length = 1962

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGVPESRT 529
           PY + K  WIPD K  Y   ++ AT GD + +G+    T
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGET 69


>AE014134-2779|AAN10970.1| 1936|Drosophila melanogaster CG17927-PM,
           isoform M protein.
          Length = 1936

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGVPESRT 529
           PY + K  WIPD K  Y   ++ AT GD + +G+    T
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGET 69


>AE014134-2778|AAN10969.1| 1936|Drosophila melanogaster CG17927-PL,
           isoform L protein.
          Length = 1936

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGVPESRT 529
           PY + K  WIPD K  Y   ++ AT GD + +G+    T
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGET 69


>AE014134-2777|AAN10968.1| 1936|Drosophila melanogaster CG17927-PK,
           isoform K protein.
          Length = 1936

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGVPESRT 529
           PY + K  WIPD K  Y   ++ AT GD + +G+    T
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGET 69


>AE014134-2776|AAN10967.1| 1962|Drosophila melanogaster CG17927-PB,
           isoform B protein.
          Length = 1962

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGVPESRT 529
           PY + K  WIPD K  Y   ++ AT GD + +G+    T
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGET 69


>AE014134-2775|AAN10966.1| 1962|Drosophila melanogaster CG17927-PH,
           isoform H protein.
          Length = 1962

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGVPESRT 529
           PY + K  WIPD K  Y   ++ AT GD + +G+    T
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGET 69


>AE014134-2774|AAN10965.1| 1962|Drosophila melanogaster CG17927-PI,
           isoform I protein.
          Length = 1962

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGVPESRT 529
           PY + K  WIPD K  Y   ++ AT GD + +G+    T
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGET 69


>AE014134-2773|AAN10964.1| 1962|Drosophila melanogaster CG17927-PA,
           isoform A protein.
          Length = 1962

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGVPESRT 529
           PY + K  WIPD K  Y   ++ AT GD + +G+    T
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGET 69


>AE014134-2772|AAN10963.1| 1962|Drosophila melanogaster CG17927-PD,
           isoform D protein.
          Length = 1962

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGVPESRT 529
           PY + K  WIPD K  Y   ++ AT GD + +G+    T
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGET 69


>AE014134-2771|AAN10962.1| 1962|Drosophila melanogaster CG17927-PF,
           isoform F protein.
          Length = 1962

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGVPESRT 529
           PY + K  WIPD K  Y   ++ AT GD + +G+    T
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGET 69


>AE013599-2920|AAF57538.1|  567|Drosophila melanogaster CG15122-PA
           protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +1

Query: 556 NKNSDFCAPLTSFDWNEWI--LTSLAPVVLTRLHHLGL-GDWTG 678
           N  S +  PL  FDWN W   L +L  +VL  L  L + G W+G
Sbjct: 282 NSVSTYFYPLQPFDWNVWFFALGALLALVLLELMWLRMFGGWSG 325


>AE014134-2770|AAF53566.3| 1960|Drosophila melanogaster CG17927-PJ,
           isoform J protein.
          Length = 1960

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGV 514
           PY + K  WIPD K  Y   ++ AT GD + +G+
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGL 64


>AE014134-2769|AAN10961.1| 1962|Drosophila melanogaster CG17927-PE,
           isoform E protein.
          Length = 1962

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGV 514
           PY + K  WIPD K  Y   ++ AT GD + +G+
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGL 64


>AE014134-2768|AAN10960.1| 1962|Drosophila melanogaster CG17927-PG,
           isoform G protein.
          Length = 1962

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGV 514
           PY + K  WIPD K  Y   ++ AT GD + +G+
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGL 64


>AE014134-2767|AAN10959.1| 1962|Drosophila melanogaster CG17927-PC,
           isoform C protein.
          Length = 1962

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGV 514
           PY + K  WIPD K  Y   ++ AT GD + +G+
Sbjct: 31  PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGL 64


>J02788-2|AAA28707.1|  264|Drosophila melanogaster protein (
           D.melanogaster myosinheavy chain gene, 5' end. ).
          Length = 264

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGVPESRT 529
           PY + K  WIPD +  Y   ++ AT GD + +G+   +T
Sbjct: 31  PYDSKKSCWIPDREEGYLLGEIKATKGDIVSVGLQGGKT 69


>J02788-1|AAA28706.1|  264|Drosophila melanogaster protein (
           D.melanogaster myosinheavy chain gene, 5' end. ).
          Length = 264

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIGV 514
           PY + K  WIPD +  Y   ++ AT GD + +G+
Sbjct: 31  PYDSKKSCWIPDREEGYLLGEIKATKGDIVSVGL 64


>AE014297-4492|AAF56978.3| 3731|Drosophila melanogaster CG15523-PA
            protein.
          Length = 3731

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 674  VQSPSPRWCSRVNTTGANEVRIHSFQSKDVRGAQKSEFLLLFRT 543
            +++   RW     TT A E  I    S  +RG+ K E+ L+ RT
Sbjct: 2572 IEAMGGRWALNTATTHATEHNIGFTFSGILRGSSKDEYSLMLRT 2615


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,842,261
Number of Sequences: 53049
Number of extensions: 747496
Number of successful extensions: 1720
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1720
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)