Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021933
         (697 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.8  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   4.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.4  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 76  TEAHGQFNI*IGIFKSNITKP 138
           TEA+ +FN+ I  +KS  T P
Sbjct: 291 TEAYTEFNLTIKYYKSGSTVP 311


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -1

Query: 265 WRLVLYISLRFVPELVLELLCGIDITD 185
           W++++Y+    +P+L   +  G+ I D
Sbjct: 316 WKMMMYLGTPVMPDLNALIATGLYIND 342


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -3

Query: 674 VQSPSPRWCSRVNTTGANEVRIHSFQSKD 588
           +Q+  P WC RV     +++ +    S D
Sbjct: 333 MQTRVPAWCDRVLLNPTDKMLVQDISSPD 361


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 419 PYPTTKIMWIPDSKGVYPDL 478
           P+   +++W PD+ G   DL
Sbjct: 2   PFIDDELLWCPDNDGKMVDL 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,763
Number of Sequences: 438
Number of extensions: 5464
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)