Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021933
(697 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 103 9e-23
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 103 1e-22
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 80 2e-15
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 80 2e-15
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 80 2e-15
At5g60010.1 68418.m07525 ferric reductase-like transmembrane com... 30 1.7
At5g51060.1 68418.m06329 respiratory burst oxidase protein C (Rb... 29 2.2
At3g45810.1 68416.m04958 ferric reductase-like transmembrane com... 29 2.2
At2g39810.1 68415.m04890 expressed protein 29 2.2
At4g25090.1 68417.m03604 respiratory burst oxidase, putative / N... 29 3.9
At1g64060.1 68414.m07256 respiratory burst oxidase protein F (Rb... 28 5.1
At5g51630.2 68418.m06402 disease resistance protein (TIR-NBS-LRR... 27 9.0
At5g51630.1 68418.m06401 disease resistance protein (TIR-NBS-LRR... 27 9.0
At5g47910.1 68418.m05918 respiratory burst oxidase protein D (Rb... 27 9.0
At3g13990.1 68416.m01766 hydroxyproline-rich glycoprotein family... 27 9.0
At1g19230.1 68414.m02393 respiratory burst oxidase protein E (Rb... 27 9.0
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 103 bits (248), Expect = 9e-23
Identities = 45/86 (52%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 QAPWPLYSMNWSVRPDKSFRLALGSFVEEYNNKVQIISLDEDTSEFTA--KSTFDHPYPT 430
+APW +Y+MNWSVR DK +RLA+ S +E+Y N+V+I+ LDE E + +F+HPYP
Sbjct: 25 EAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRSDPNLSFEHPYPP 84
Query: 431 TKIMWIPDSKGVYPDLLATSGDYLRI 508
TK ++IPD + PDLLATS D+LR+
Sbjct: 85 TKTIFIPDKECQRPDLLATSSDFLRL 110
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 547 LNNNKNSDFCAPLTSFDWNE 606
LN+NKNS+FC PLTSFDWNE
Sbjct: 126 LNSNKNSEFCGPLTSFDWNE 145
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 103 bits (247), Expect = 1e-22
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 QAPWPLYSMNWSVRPDKSFRLALGSFVEEYNNKVQIISLDEDTSEFTAKST--FDHPYPT 430
+APW +Y+MNWS+R DK +RLA+ S +E+Y N+V+I+ LDE E + F+HPYP
Sbjct: 25 EAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRSDPNLCFEHPYPP 84
Query: 431 TKIMWIPDSKGVYPDLLATSGDYLRI 508
TK +IPD + PDLLATS D+LR+
Sbjct: 85 TKTSFIPDKECQRPDLLATSSDFLRL 110
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 547 LNNNKNSDFCAPLTSFDWNE 606
L+++KNS+F P+TSFDWNE
Sbjct: 126 LSSDKNSEFSGPITSFDWNE 145
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/88 (45%), Positives = 61/88 (69%), Gaps = 5/88 (5%)
Frame = +2
Query: 260 APWPLYSMNWS-VRPDKSFRLALGSFVEEYNNKVQIISLDED--TSEFTAKSTFDHPYPT 430
+P+PLY+M +S +R R+A+GSF+E+YNN++ I+S D D T + +F+HPYP
Sbjct: 20 SPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPNLSFEHPYPP 79
Query: 431 TKIMWIPDS--KGVYPDLLATSGDYLRI 508
TK+M+ P S + DLLA+SGD+LR+
Sbjct: 80 TKLMFSPPSLRRPSSGDLLASSGDFLRL 107
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1
Query: 544 VLNNNKNSDFCAPLTSFDWNE 606
VLNN+K S+FCAPLTSFDWN+
Sbjct: 122 VLNNSKTSEFCAPLTSFDWND 142
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/88 (45%), Positives = 61/88 (69%), Gaps = 5/88 (5%)
Frame = +2
Query: 260 APWPLYSMNWS-VRPDKSFRLALGSFVEEYNNKVQIISLDED--TSEFTAKSTFDHPYPT 430
+P+PLY+M +S +R R+A+GSF+E+YNN++ I+S D D T + +F+HPYP
Sbjct: 20 SPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPNLSFEHPYPP 79
Query: 431 TKIMWIPDS--KGVYPDLLATSGDYLRI 508
TK+M+ P S + DLLA+SGD+LR+
Sbjct: 80 TKLMFSPPSLRRPSSGDLLASSGDFLRL 107
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1
Query: 544 VLNNNKNSDFCAPLTSFDWNE 606
VLNN+K S+FCAPLTSFDWN+
Sbjct: 122 VLNNSKTSEFCAPLTSFDWND 142
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/88 (45%), Positives = 61/88 (69%), Gaps = 5/88 (5%)
Frame = +2
Query: 260 APWPLYSMNWS-VRPDKSFRLALGSFVEEYNNKVQIISLDED--TSEFTAKSTFDHPYPT 430
+P+PLY+M +S +R R+A+GSF+E+YNN++ I+S D D T + +F+HPYP
Sbjct: 20 SPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPNLSFEHPYPP 79
Query: 431 TKIMWIPDS--KGVYPDLLATSGDYLRI 508
TK+M+ P S + DLLA+SGD+LR+
Sbjct: 80 TKLMFSPPSLRRPSSGDLLASSGDFLRL 107
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1
Query: 544 VLNNNKNSDFCAPLTSFDWNE 606
VLNN+K S+FCAPLTSFDWN+
Sbjct: 122 VLNNSKTSEFCAPLTSFDWND 142
>At5g60010.1 68418.m07525 ferric reductase-like transmembrane
component family protein similar to respiratory burst
oxidase protein D RbohD from Arabidopsis thaliana,
EMBL:AF055357 [gi:3242789], respiratory burst oxidase
homolog from Solanum tuberosum [GI:16549089]; contains
Pfam profile PF01794 Ferric reductase like transmembrane
component
Length = 839
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 574 CAPLTSFDWNEWILTSLAPVVLTRLHHLGLGDWT 675
C L+ F+W+ + +TS +H LGDWT
Sbjct: 592 CPDLSKFEWHPFSITSAPGDDYLSVHIRALGDWT 625
>At5g51060.1 68418.m06329 respiratory burst oxidase protein C
(RbohC) / NADPH oxidase nearly identical to respiratory
burst oxidase protein C from Arabidopsis thaliana
[gi:3242785]
Length = 905
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 574 CAPLTSFDWNEWILTSLAPVVLTRLHHLGLGDWT 675
CA ++ F+W+ + +TS +H LGDWT
Sbjct: 628 CAAVSPFEWHPFSITSAPQDDYLSVHIRVLGDWT 661
>At3g45810.1 68416.m04958 ferric reductase-like transmembrane
component family protein similar to respiratory burst
oxidase protein D RbohD from Arabidopsis thaliana,
EMBL:AF055357 [gi:3242789], similar to respiratory burst
oxidase protein D RbohD from Arabidopsis thaliana,
EMBL:AF055357 [gi:3242789], respiratory burst oxidase
homolog from Solanum tuberosum [GI:16549089]; contains
Pfam profile PF01794 Ferric reductase like transmembrane
component
Length = 912
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 574 CAPLTSFDWNEWILTSLAPVVLTRLHHLGLGDWT 675
C ++ F+W+ + +TS +H LGDWT
Sbjct: 602 CPDISKFEWHPFSITSAPGDEYLSVHIRALGDWT 635
>At2g39810.1 68415.m04890 expressed protein
Length = 865
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 526 YTLFECVLNNNKNSDFCAPLTSFDWNEWILTSLAPVVLTRLHHLGLGDW 672
Y+LF+ +NNN S C +T+ +E ++S PV+ L + + DW
Sbjct: 143 YSLFDVAMNNNLISVVCHYITNVCMDETAVSS-DPVIAFLLDEVVVKDW 190
>At4g25090.1 68417.m03604 respiratory burst oxidase, putative /
NADPH oxidase, putative similar to respiratory burst
oxidase protein A from Arabidopsis thaliana, gb:AF055353
[gi:3242781], protein D [gi:3242789]; contains Pfam
profile PF01794 Ferric reductase like transmembrane
component
Length = 849
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 574 CAPLTSFDWNEWILTSLAPVVLTRLHHLGLGDWT 675
C ++ F+W+ + +TS +H LGDWT
Sbjct: 581 CPAVSPFEWHPFSITSTPQDDYLSVHIKALGDWT 614
>At1g64060.1 68414.m07256 respiratory burst oxidase protein F
(RbohF) (RbohAp108) / NADPH oxidase identical to
cytochrome b245 beta chain homolog RbohAp108
[GI:2654868], respiratory burst oxidase protein F
[gi:3242456], from Arabidopsis thaliana
Length = 944
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 574 CAPLTSFDWNEWILTSLAPVVLTRLHHLGLGDWT 675
C ++ F+W+ + +TS +H LGDWT
Sbjct: 662 CPAVSPFEWHPFSITSAPEDDYISIHIRQLGDWT 695
>At5g51630.2 68418.m06402 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1175
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +1
Query: 7 CLFSPHKTKFLVNFQL*NT----LIEGTEAHGQFNI*IGIFKSNITKPLGGHSVILRQRN 174
C+ S K ++LVN ++ + L EGT+ G + + KS K + S + N
Sbjct: 529 CMPSNFKAEYLVNLEMAYSQLERLWEGTQQLGSLKK-MDLSKSENLKEIPDLSYAV---N 584
Query: 175 IKHYQ*CRCHTAVRVPVQARNVKK 246
++ C C + V +P RN+ K
Sbjct: 585 LEEMDLCSCKSLVTLPSSVRNLDK 608
>At5g51630.1 68418.m06401 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1229
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +1
Query: 7 CLFSPHKTKFLVNFQL*NT----LIEGTEAHGQFNI*IGIFKSNITKPLGGHSVILRQRN 174
C+ S K ++LVN ++ + L EGT+ G + + KS K + S + N
Sbjct: 593 CMPSNFKAEYLVNLEMAYSQLERLWEGTQQLGSLKK-MDLSKSENLKEIPDLSYAV---N 648
Query: 175 IKHYQ*CRCHTAVRVPVQARNVKK 246
++ C C + V +P RN+ K
Sbjct: 649 LEEMDLCSCKSLVTLPSSVRNLDK 672
>At5g47910.1 68418.m05918 respiratory burst oxidase protein D
(RbohD) / NADPH oxidase identical to respiratory burst
oxidase protein D from Arabidopsis thaliana [gi:3242789]
Length = 921
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 574 CAPLTSFDWNEWILTSLAPVVLTRLHHLGLGDWT 675
C ++ F+W+ + +TS +H LGDWT
Sbjct: 651 CRAVSPFEWHPFSITSAPGDDYLSVHIRTLGDWT 684
>At3g13990.1 68416.m01766 hydroxyproline-rich glycoprotein family
protein
Length = 883
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +2
Query: 314 RLALGSFVEEYNNKVQIISLDEDTSEFTAKSTFDHPYPTTKIMWIPDSKGVYPDLLATSG 493
+L GSFV+E+N+ S E++ D P T D GV P T
Sbjct: 467 QLTFGSFVQEFNSSRNSESAFEESHSSEEVRESDRSSPVTCPEASADGPGVLP---ITID 523
Query: 494 DYLRIGVPES 523
D++R+ +S
Sbjct: 524 DHVRVSRSDS 533
>At1g19230.1 68414.m02393 respiratory burst oxidase protein E
(RbohE) / NADPH oxidase nearly identical to respiratory
burst oxidase protein E GI:3242787 [gi:3242787] from
[Arabidopsis thaliana]
Length = 926
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 574 CAPLTSFDWNEWILTSLAPVVLTRLHHLGLGDWT 675
C ++ F+W+ + +TS +H LGDWT
Sbjct: 640 CPTISRFEWHPFSITSAPGDDQLSVHIRTLGDWT 673
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,252,298
Number of Sequences: 28952
Number of extensions: 350930
Number of successful extensions: 867
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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