Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021929
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    50   5e-08
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    31   0.027
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    31   0.027
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    30   0.083
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    29   0.11 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.1  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   4.1  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   7.2  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   7.2  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.5  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 50.4 bits (115), Expect = 5e-08
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +2

Query: 233 VPMQRMLATFTVQKTLDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQ-YICD 409
           +  +R  +TF  + +   H   H+G + YRC+ CP A  S   L  H   H D + Y CD
Sbjct: 327 IKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCD 386

Query: 410 HCGRAFKIKEALIPHLD-THKP 472
            C + F+ K+ L  H++  H P
Sbjct: 387 QCAQTFRQKQLLKRHMNYYHNP 408



 Score = 47.6 bits (108), Expect = 4e-07
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
 Frame = +2

Query: 260 FTVQKTLDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEK-KHL-DVQYICDHCGRAFKI 433
           F    +L +H+N H G +P+RCK C   +T+   L RH + +H  +  + C  C  A   
Sbjct: 164 FKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVE 223

Query: 434 KEALIPHLDTHKPYRKFGC 490
              L  H+ TH   + F C
Sbjct: 224 LSKLKRHIRTHTGEKPFQC 242



 Score = 44.0 bits (99), Expect = 5e-06
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
 Frame = +2

Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQY----------ICDHCGRAF 427
           L+SH+ LH   +PY+C  C   +     L RH   + +  Y          IC  C R F
Sbjct: 370 LESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPF 429

Query: 428 KIKEALIPHLDTHKP 472
           + K  LI H+  H P
Sbjct: 430 RHKGNLIRHMAMHDP 444



 Score = 40.3 bits (90), Expect = 6e-05
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
 Frame = +2

Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHL-DVQYICDHCGRAFKIKEALIPH 454
           L  H+  H G +P++C  C  A      L+RH + H  +  Y CD C   F    +L  H
Sbjct: 227 LKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAH 286

Query: 455 LDTHKPYRK--FGCHL 496
              H+   K  F C L
Sbjct: 287 KMIHQVGNKPVFQCKL 302



 Score = 37.9 bits (84), Expect = 3e-04
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +2

Query: 293 NLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQ-YICDHCGRAFKIKEALIPHLDTHK 469
           NLH   +P +CK C + +    +   H K H   + Y C++C  A      L  HL  H 
Sbjct: 319 NLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHT 378

Query: 470 PYRKFGC 490
             + + C
Sbjct: 379 DQKPYKC 385



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = +2

Query: 317 YRCKTCPAAYTSPTALSRHEKKHL-DVQYICDHCGRAFKIKEALIPHLDTH---KPYRKF 484
           Y C  C         LSRH K H  D  + C  C R FK   +L  H++TH   KP+R  
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCK 186

Query: 485 GC 490
            C
Sbjct: 187 HC 188



 Score = 27.5 bits (58), Expect = 0.44
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 505 ADAQKAALQLHIDRVHRNLPPPCACPVCPKRFPRMSLLKTHMM 633
           A   K  L  H+ R+H     P +C VC  RF + + LK H M
Sbjct: 248 ASPDKFKLTRHM-RIHTG-EKPYSCDVCFARFTQSNSLKAHKM 288



 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 568 PCACPVCPKRFPRMSLLKTHMMSEH 642
           P  C  C + F +  LLK HM   H
Sbjct: 382 PYKCDQCAQTFRQKQLLKRHMNYYH 406


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 31.5 bits (68), Expect = 0.027
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 550 HRNLPPPCACPVCPKRFPRMSLLKTHMMSEH 642
           H + P    CP CP  + R+  L++H+  +H
Sbjct: 544 HSHTPQRSLCPYCPASYSRIDTLRSHLRIKH 574



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -1

Query: 687 RQLLEEH-FTRHDVESVFAHHVRLQQRHAGEPLGADGAGAGRG 562
           +Q  ++H  ++H   +   HH     +H G   G  G G G G
Sbjct: 216 QQQSQQHPSSQHQQPTHQTHHHHHHHQHGGGVGGGGGGGGGGG 258


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 31.5 bits (68), Expect = 0.027
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 550 HRNLPPPCACPVCPKRFPRMSLLKTHMMSEH 642
           H + P    CP CP  + R+  L++H+  +H
Sbjct: 520 HSHTPQRSLCPYCPASYSRIDTLRSHLRIKH 550


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 29.9 bits (64), Expect = 0.083
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +1

Query: 535 HI-DRVHRNLPPPCACPVCPKRFPRMSLLKTHMMSEHGL-NIMTRKMFFKKLPTLS 696
           HI +  H + P    CP+C   + R   L+TH   +H + N  TRK      PT++
Sbjct: 511 HIRNHYHVHFPGRFECPLCRATYTRSDNLRTHCKFKHPMFNPDTRKFENMLSPTMA 566



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -1

Query: 687 RQLLEEH-FTRHDVESVFAHHVRLQQRHAGEPLGADGAGAGRG 562
           +Q  ++H  ++H   +   HH     +H G   G  G G G G
Sbjct: 264 QQQSQQHPSSQHQQPTHQTHHHHHHHQHGGGVGGGGGGGGGGG 306


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 535  HIDRVHRNLPPPCACPVCPKRFPRMSLLKTHMMSEH 642
            H   +HR  P    CPVC ++F R   +K H   +H
Sbjct: 913  HHANIHR--PQSHECPVCGQKFTRRDNMKAHCKVKH 946



 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -1

Query: 651 VESVFAHHVRLQQRHAGEPLGADGAGAGRG 562
           VES+  HH        G   G  GAG G G
Sbjct: 658 VESLVEHHRLAASLGGGAVGGGSGAGGGAG 687



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -1

Query: 687 RQLLEEH-FTRHDVESVFAHHVRLQQRHAGEPLGADGAGAGRG 562
           +Q  ++H  ++H   +   HH     +H G   G  G G G G
Sbjct: 264 QQQSQQHPSSQHQQPTHQTHHHHHHHQHGGGVGGGGGGGGGGG 306



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = -1

Query: 657 HDVESVFAHHVRLQQRHAGEPLGADGAGAGRGQVPVHA 544
           H       HH  LQQ+HA      + AG  R  V V A
Sbjct: 724 HHQHHAAPHHHSLQQQHASSAF--NSAGDARSGVAVAA 759


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -1

Query: 663 TRHDVESVFAHHVRLQQRHAGEPLGADGAGAGRGQ 559
           T H   +V AHH  L Q HA     A  A A + Q
Sbjct: 864 THHQAAAVAAHHHHL-QHHAAMVAAAAAAAASQEQ 897


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +3

Query: 75  KTNLYKHEKRCISSDATIVLKARASLLGNKARSRPYINHYKNKPPRVFKSNKKFQCS 245
           K+ L +H  + I+SD   V+K     +      + +I   +N+PP+V K N +F  S
Sbjct: 258 KSQLREHVSQEINSDLWKVMKDVKDFI-KLLLHKAFI--VENQPPQVMKMNTRFCAS 311


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -1

Query: 633 HHVRLQQRHAGEPLGADGAGAG 568
           HH      HAGEP G  G  AG
Sbjct: 62  HHAL--SHHAGEPSGGGGGRAG 81


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 535 HIDRVHRNLPPPCACPVCPKRFPRMSLLKTHMMSE 639
           H  RV   + PP   P   +  P  SLL  H M+E
Sbjct: 140 HYKRVESPVLPPVLVPRHSEFAPGHSLLPFHQMNE 174


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 606 AGEPLGADGAGA 571
           A EP+GA GAGA
Sbjct: 50  ASEPIGATGAGA 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,687
Number of Sequences: 2352
Number of extensions: 13548
Number of successful extensions: 45
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)