Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021929
(714 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 39 0.003
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 38 0.009
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 38 0.009
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 37 0.012
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 36 0.020
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 35 0.047
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 33 0.14
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 33 0.19
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 33 0.25
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 33 0.25
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 32 0.33
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 32 0.43
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 31 0.57
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 31 0.57
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 31 0.57
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 31 0.57
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 31 0.76
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 31 0.76
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 31 0.76
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 31 1.0
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 31 1.0
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 30 1.3
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 30 1.3
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 30 1.3
At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein ... 30 1.3
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 30 1.8
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 30 1.8
At4g02725.1 68417.m00370 expressed protein 29 3.1
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 29 3.1
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 29 3.1
At1g75710.1 68414.m08795 zinc finger (C2H2 type) family protein ... 29 4.0
At1g65180.1 68414.m07390 DC1 domain-containing protein contains ... 29 4.0
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 28 5.3
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 28 5.3
At5g57320.1 68418.m07160 villin, putative similar to villin 2 (V... 28 7.1
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 28 7.1
At1g66500.1 68414.m07554 zinc finger (C2H2-type) family protein ... 28 7.1
At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein ... 28 7.1
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 27 9.3
At5g54340.1 68418.m06767 zinc finger (C2H2 type) protein-related... 27 9.3
At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein ... 27 9.3
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 27 9.3
At3g49270.1 68416.m05385 expressed protein 27 9.3
At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein ... 27 9.3
At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein ... 27 9.3
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 27 9.3
At2g01120.1 68415.m00020 origin recognition complex subunit 4, p... 27 9.3
At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein ... 27 9.3
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/74 (33%), Positives = 34/74 (45%)
Frame = +2
Query: 236 PMQRMLATFTVQKTLDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHC 415
P R L F +TL +H G+RP+ C+ C A+ HEK + Y C C
Sbjct: 316 PRARPLKDF---RTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWY-CS-C 370
Query: 416 GRAFKIKEALIPHL 457
G FK K +L H+
Sbjct: 371 GSDFKHKRSLKDHV 384
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 3 ERHYQEKHGQRYLICFACGVDFRSKTNLYKHEKRC 107
+ HY+ KHG R C CG F K + HEK C
Sbjct: 328 QTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNC 362
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +2
Query: 257 TFTVQKTLDSHMNLHKGLRPYRC--KTCPAAYTSPTALSRHEKKHL-DVQYICDH--CGR 421
TF L H ++H G R Y C + C + + L RH H + YIC + CG+
Sbjct: 89 TFFDVSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGK 147
Query: 422 AFKIKEALIPHLDTH 466
AF + L H+ TH
Sbjct: 148 AFSLDFNLRSHMKTH 162
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 332 CPAAYTSPTALSRHEKKHLDVQYICDH--CGRAFKIKEALIPHLDTHKPYRKFGC 490
C + +AL +H H + QY+CD CG+ F L H H R + C
Sbjct: 86 CGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYIC 140
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 317 YRCKTCPAAYTSPTALSRHEKKH-LDVQYIC--DHCGRAFKIKEALIPHLDTHK 469
+ C+ C A + P L +H + H L+ + C D C +++ K+ L HL THK
Sbjct: 66 HTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHK 119
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 398 YICDHCGRAFKIKEALIPHLDTHKPYRKFGCHL 496
+ C CG FK L H+ +H R F C++
Sbjct: 66 HTCQECGAEFKKPAHLKQHMQSHSLERSFTCYV 98
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 272 KTLDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIP 451
+TL +H G++P+ C+ C A+ HEK + Y CG FK K +L
Sbjct: 286 RTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCI--CGSDFKHKRSLKD 343
Query: 452 HL 457
H+
Sbjct: 344 HI 345
Score = 34.3 bits (75), Expect = 0.081
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 3 ERHYQEKHGQRYLICFACGVDFRSKTNLYKHEKRC 107
+ HY+ KHG + +C CG F + + HEK C
Sbjct: 289 QTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNC 323
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 272 KTLDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIP 451
+TL +H G +P+ C+ C A+ HEK + Y C CG FK K +L
Sbjct: 247 RTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWY-CS-CGSDFKHKRSLKD 304
Query: 452 HL 457
H+
Sbjct: 305 HV 306
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 3 ERHYQEKHGQRYLICFACGVDFRSKTNLYKHEKRC 107
+ HY+ KHG + C CG F K + HEK C
Sbjct: 250 QTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNC 284
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 35.1 bits (77), Expect = 0.047
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 260 FTVQKTLDSHMNLHKGLRPYRC--KTCPAAYTSPTALSRHEKKHL-DVQYIC--DHCGRA 424
F K L H +HK RP+ C K C + A + H + H + YIC D CG +
Sbjct: 1249 FRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLS 1308
Query: 425 FK 430
F+
Sbjct: 1309 FR 1310
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 257 TFTVQKTLDSHMNLHKGLRPYRCKT--CPAAYTSPTALSRHEKK 382
TF Q H+ LH G RPY CK C ++ + SRH +K
Sbjct: 1278 TFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRHRRK 1321
Score = 31.5 bits (68), Expect = 0.57
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = +2
Query: 314 PYRC--KTCPAAYTSPTALSRHEKKHLDVQYICDH--CGRAFKIKEALIPHLDTHKPYRK 481
P RC + C + S L H++ C H CG+ F+ + L+ H HK R
Sbjct: 1214 PNRCYLEGCKMTFESKAKLQTHKRNR------CTHEGCGKKFRAHKYLVLHQRVHKDERP 1267
Query: 482 FGC 490
F C
Sbjct: 1268 FEC 1270
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H + G + ++C+ C Y + H K +Y CD CG F K++ I H
Sbjct: 146 IKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCD-CGTLFSRKDSFITH 203
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 3 ERHYQEKHGQRYLICFACGVDFRSKTNLYKHEKRC 107
++HY KHG++ C C + +++ H K C
Sbjct: 147 KKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTC 181
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +2
Query: 272 KTLDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIP 451
+TL +H G +P+ C C A HEK + Y C CG FK K +L
Sbjct: 250 RTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWY-CT-CGSDFKHKRSLKD 307
Query: 452 HL 457
H+
Sbjct: 308 HI 309
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 3 ERHYQEKHGQRYLICFACGVDFRSKTNLYKHEKRC 107
+ HY+ KHG + C CG K + HEK C
Sbjct: 253 QTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNC 287
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H + G + ++C C Y + H K +Y CD CG F K++ I H
Sbjct: 132 IKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICGTKEYRCD-CGTLFSRKDSFITH 189
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 272 KTLDSHMNLHKGLRPYRC-KTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALI 448
+TL +H G +P+RC K C + HE K+ + C CG FK K +L
Sbjct: 171 RTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHE-KNCGKLWFC-VCGSDFKHKRSLK 228
Query: 449 PHL 457
H+
Sbjct: 229 DHV 231
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 3 ERHYQEKHGQRYLICFACGVDFRSKTNLYKHEKRC 107
+ HY+ KHG + C CG K + HEK C
Sbjct: 217 QTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNC 251
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +2
Query: 299 HKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPHLDT 463
H + + C+ C Y + H K + CD CGR F E+ I H DT
Sbjct: 142 HSNHKQWICERCSKGYAVQSDYKAHLKTCGTRGHSCD-CGRVFSRVESFIEHQDT 195
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H G + ++C C Y + H K +Y CD CG F +++ I H
Sbjct: 163 IKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTCGTKEYRCD-CGTLFSRRDSFITH 220
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +3
Query: 3 ERHYQEKHGQRYLICFACGVDFRSKTNLYKHEKRC 107
++H+ KHG++ C C + +++ H K C
Sbjct: 164 KKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTC 198
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H G + ++C+ C Y + H K +Y CD CG F +++ I H
Sbjct: 146 IKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTIFSRRDSYITH 203
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Frame = +3
Query: 3 ERHYQEKHGQRYLICFACGVDFRSKTNLYKHEKRC----ISSDATIVLKARASLLGNKAR 170
++HY KHG++ C C + +++ H K C D + R S + ++A
Sbjct: 147 KKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAF 206
Query: 171 SRPYINHYKNKPPRVFKS 224
I P F S
Sbjct: 207 CDALIQETARNPTVSFTS 224
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H G + ++C+ C Y + H K +Y CD CG F +++ I H
Sbjct: 156 IKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKEYKCD-CGTLFSRRDSFITH 213
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H G + ++C+ C Y + H K +Y CD CG F +++ I H
Sbjct: 133 IKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCD-CGTIFSRRDSFITH 190
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H G + ++C+ C Y + H K +Y CD CG F +++ I H
Sbjct: 124 IKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKCD-CGTLFSRRDSFITH 181
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H G + ++C C Y + H K +Y CD CG F +++ I H
Sbjct: 144 IKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTLFSRRDSFITH 201
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 3 ERHYQEKHGQRYLICFACGVDFRSKTNLYKHEKRC 107
++HY KHG++ C C + +++ H K C
Sbjct: 145 KKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC 179
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +2
Query: 299 HKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPHLDT 463
H + + C+ C Y + H K + CD CGR F E+ I H DT
Sbjct: 112 HSVHKQWVCERCSKGYAVQSDYKAHLKTCGSRGHSCD-CGRVFSRVESFIEHQDT 165
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H + G + ++C C Y + H K ++ CD CG F K++ I H
Sbjct: 70 IKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSREFRCD-CGTLFSRKDSFISH 127
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H G + ++C C Y + H K +Y CD CG F +++ I H
Sbjct: 145 IKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTIFSRRDSYITH 202
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 3 ERHYQEKHGQRYLICFACGVDFRSKTNLYKHEKRC 107
++HY KHG++ C C + +++ H K C
Sbjct: 146 KKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC 180
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H G + + C+ C Y + H K +Y CD CG F +++ I H
Sbjct: 129 IKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCD-CGTIFSRRDSFITH 186
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +3
Query: 3 ERHYQEKHGQRYLICFACGVDFRSKTNLYKHEKRC 107
++H+ KHG++ C C + +++ H K C
Sbjct: 130 KKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTC 164
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 398 YICDHCGRAFKIKEALIPHLDTHK 469
Y C CGR FK +AL H++ H+
Sbjct: 55 YSCSFCGREFKSAQALGGHMNVHR 78
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H G + ++C C Y + H K +Y CD CG F +++ I H
Sbjct: 126 IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCD-CGTLFSRRDSFITH 183
>At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 272 KTLDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKH 385
K +DS + R Y C C +T+P AL H H
Sbjct: 6 KQIDSGSGSGENRRTYDCDICKRGFTNPQALGGHNNIH 43
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +2
Query: 278 LDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPH 454
+ H G + ++C+ C Y + H K Y CD CG F K+ I H
Sbjct: 146 IKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKICGTRDYRCD-CGTLFSRKDTFITH 203
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 299 HKGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPHLD 460
H + + C+ C Y + H K + CD CGR F E+ I H D
Sbjct: 139 HSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCD-CGRVFSRVESFIEHQD 191
>At4g02725.1 68417.m00370 expressed protein
Length = 165
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 257 LRAFAALELLVGLENSWWFILVMIYVRTTSSLITKER 147
L + L VG+ +WW+I + Y ++ S +I + R
Sbjct: 112 LHSVIVSSLAVGVIGAWWYIFLYSYPKSYSEMIAERR 148
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 395 QYICDHCGRAFKIKEALIPHLDTHKPYR 478
+Y C+ CG+ FK +AL H +HK R
Sbjct: 172 RYKCETCGKVFKSYQALGGHRASHKKNR 199
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 236 PMQRMLATFTVQKTLDSHMNLHKGLRPYRC--KTCPAAYTSPTALSRHEKK 382
P + TF + H+ +H G RPY C C + + SRH++K
Sbjct: 1293 PWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKRK 1343
>At1g75710.1 68414.m08795 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 462
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 562 PPPCACPVCPKRFPRMSLLKTHMMSEHGLN 651
P CAC C + FP++ L+ H H ++
Sbjct: 201 PRVCACSQCGEVFPKLESLELHQAVRHAVS 230
>At1g65180.1 68414.m07390 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 653
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 335 PAAYTSPTALS---RHEKKHLDVQYICDHCGRAFKIKEALIPHLDTHK 469
P YTSP + E H+ ++ + D CG A K AL+PH H+
Sbjct: 483 PLFYTSPKGVCSACNKETSHV-LRCVEDKCGYALDFKCALLPHEVKHR 529
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 398 YICDHCGRAFKIKEALIPHLDTHKPYR 478
YIC+ C R F +AL H++ H+ R
Sbjct: 21 YICEFCERGFSNAQALGGHMNIHRKDR 47
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +2
Query: 242 QRMLATFTVQKTLDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKH 385
+R L T + T + G Y+CKTC + S AL H H
Sbjct: 157 RRFLETSSSNGTTTNGGGGRAGYYVYQCKTCDRTFPSFQALGGHRASH 204
>At5g57320.1 68418.m07160 villin, putative similar to villin 2 (VLN2)
[Arabidopsis thaliana] GI:3415115, villin 3 (VLN3)
[Arabidopsis thaliana] GI:3415117; contains Pfam profiles
PF00626: Gelsolin repeat, PF02209: Villin headpiece
domain
Length = 962
Score = 27.9 bits (59), Expect = 7.1
Identities = 26/104 (25%), Positives = 41/104 (39%)
Frame = +1
Query: 388 RRSVHLRSLRPRVQDQRSSDTSLGYTQTVSQVRVPPVRPADAQKAALQLHIDRVHRNLPP 567
+R V S R V D +S S T + + RV PA AA ++ +++ PP
Sbjct: 751 KRRVPAYSSRSTVPD-KSQPRSRSMTFSPDRARVRGRSPAFNALAANFEKLNIRNQSTPP 809
Query: 568 PCACPVCPKRFPRMSLLKTHMMSEHGLNIMTRKMFFKKLPTLSE 699
P P+ K +P+ ++ +F K PT E
Sbjct: 810 PMVSPMVRKLYPKSHAPDLSKIAPKSAIAARTALFEKPTPTSQE 853
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 272 KTLDSHMNLHKGLRPYRCKTCPAAYTSPTALSRHEKKH 385
+T S+ G Y+CKTC + S AL H H
Sbjct: 138 ETSSSNSGGKAGYYVYQCKTCDRTFPSFQALGGHRASH 175
>At1g66500.1 68414.m07554 zinc finger (C2H2-type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type,
domain; similar to S-locus protein 4 (GI:6069478)
[Brassica rapa]; similar to Pre-mRNA cleavage complex II
protein Pcf11 (Fragment) (Swiss-Prot:O94913) [Homo
sapiens]
Length = 416
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = +2
Query: 341 AYTSPTALS-RHEK--KHL--DVQYICDHCGRAFKIKEALIPHLDTH 466
++ +P++L+ RHE K L D+ C CG FK +E H+D H
Sbjct: 230 SFDNPSSLNVRHESVIKSLYSDMPRQCSSCGLRFKCQEEHSKHMDWH 276
>At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 211
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 347 TSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPHLDTHKPYR 478
TS T + RHE C +CG+ F +AL H + HK R
Sbjct: 52 TSLTVMKRHE---------CQYCGKEFANSQALGGHQNAHKKER 86
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 395 QYICDHCGRAFKIKEALIPHLDTHK 469
+Y CD CG+ + +AL H +HK
Sbjct: 227 KYTCDTCGKVLRSYQALGGHRTSHK 251
>At5g54340.1 68418.m06767 zinc finger (C2H2 type) protein-related
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 244
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2
Query: 398 YICDHCGRAFKIKEALIPHLDTHKPYRK 481
YIC C RAF AL H THK R+
Sbjct: 47 YICYLCKRAFPTPHALGGHGTTHKEDRE 74
>At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 201
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 317 YRCKTCPAAYTSPTALSRHEKKH 385
Y+CK CP + AL H+ H
Sbjct: 27 YKCKYCPRKFDKTQALGGHQNAH 49
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 335 PAAYTSPTALSRHEKKHLDVQYICDHCGRAFKIKEALIPHLDTHK 469
P+ + S + LS H+K Y C CG++F +AL H +H+
Sbjct: 78 PSDHHSLSPLSDHQK-----DYKCSVCGKSFPSYQALGGHKTSHR 117
>At3g49270.1 68416.m05385 expressed protein
Length = 148
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 373 REETFRRSVHLRSLRPRVQDQRSSDTSLGYTQTVSQV---RVPPVRPADAQKA 522
R +T R + L PR+ D D + + QT+++V PP R D KA
Sbjct: 89 RGQTTNRVIRLSPPPPRMMDYPKKDPNPSHDQTINRVIRLSPPPPRMMDYPKA 141
>At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein
(ZAT7) identical to zinc finger protein ZAT7
[Arabidopsis thaliana] gi|1418341|emb|CAA67234; contains
Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 168
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 311 RPYRCKTCPAAYTSPTALSRHEKKH 385
R +RCKTC ++S AL H H
Sbjct: 38 RVFRCKTCLKEFSSFQALGGHRASH 62
>At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 164
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 311 RPYRCKTCPAAYTSPTALSRHEKKH 385
R +RCKTC ++S AL H H
Sbjct: 35 RVFRCKTCLKEFSSFQALGGHRASH 59
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 398 YICDHCGRAFKIKEALIPHLDTHK 469
Y C C R FK +AL H++ H+
Sbjct: 39 YTCSFCRREFKSAQALGGHMNVHR 62
>At2g01120.1 68415.m00020 origin recognition complex subunit 4,
putative (ORC4) similar to origin recognition complex
subunit 4 (GI:15866782) [Zea mays]
Length = 121
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 242 QRMLATFTVQKTLDSHMNLHKGLRPYRCKTCPA 340
Q + +QK L S LH+G+R + C CPA
Sbjct: 83 QSQTGEYRLQKLLISASELHQGMRSHAC--CPA 113
>At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 324
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 302 KGLRPYRCKTCPAAYTSPTALSRHEKKHLDVQ 397
K + ++CK C +TS AL H H V+
Sbjct: 145 KTAQVFQCKACKKVFTSHQALGGHRASHKKVK 176
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,258,694
Number of Sequences: 28952
Number of extensions: 260584
Number of successful extensions: 1020
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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