BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021927 (725 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 46 3e-07 M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 40 2e-05 AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. 39 4e-05 M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 39 6e-05 M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 37 2e-04 AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 37 2e-04 M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 36 5e-04 M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 33 0.002 M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 32 0.006 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.96 X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 6.8 AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 6.8 EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.0 DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 9.0 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.0 >M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone H40. ). Length = 74 Score = 46.4 bits (105), Expect = 3e-07 Identities = 19/31 (61%), Positives = 26/31 (83%) Frame = +1 Query: 511 LGLTDTQVKTWYQNRRTKWKRQTAVGLELLA 603 L LT+TQVK W+QNRRTKWK+Q GL++++ Sbjct: 45 LSLTETQVKIWFQNRRTKWKKQNP-GLDVIS 74 Score = 40.7 bits (91), Expect = 1e-05 Identities = 19/37 (51%), Positives = 26/37 (70%) Frame = +2 Query: 395 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELA 505 ++ R+ARTAFT QL LE F+ +YLSV +R+ LA Sbjct: 6 REARRARTAFTYEQLVALENKFKTTRYLSVCERLNLA 42 >M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone H17. ). Length = 79 Score = 40.3 bits (90), Expect = 2e-05 Identities = 17/39 (43%), Positives = 26/39 (66%) Frame = +2 Query: 395 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELAAN 511 K RK RT FT QL +LEK F ++YL++ +R E +++ Sbjct: 7 KPNRKPRTPFTTQQLLSLEKKFREKQYLTIAERAEFSSS 45 Score = 36.7 bits (81), Expect = 2e-04 Identities = 17/30 (56%), Positives = 20/30 (66%) Frame = +1 Query: 511 LGLTDTQVKTWYQNRRTKWKRQTAVGLELL 600 L LT+TQVK W+QNRR K KR +E L Sbjct: 46 LHLTETQVKIWFQNRRAKAKRLQEAEIEKL 75 >AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. Length = 43 Score = 39.1 bits (87), Expect = 4e-05 Identities = 15/21 (71%), Positives = 19/21 (90%) Frame = +1 Query: 511 LGLTDTQVKTWYQNRRTKWKR 573 LGLT TQVK W+QNRR+K+K+ Sbjct: 18 LGLTQTQVKIWFQNRRSKYKK 38 Score = 21.4 bits (43), Expect = 9.0 Identities = 8/17 (47%), Positives = 14/17 (82%) Frame = +2 Query: 461 ERQKYLSVQDRMELAAN 511 +R +YL++ +R ELAA+ Sbjct: 1 QRTQYLALPERAELAAS 17 >M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone H90. ). Length = 74 Score = 38.7 bits (86), Expect = 6e-05 Identities = 14/24 (58%), Positives = 19/24 (79%) Frame = +1 Query: 511 LGLTDTQVKTWYQNRRTKWKRQTA 582 L LT+ Q+K W+QNRR KWK++ A Sbjct: 45 LCLTERQIKIWFQNRRMKWKKENA 68 Score = 29.9 bits (64), Expect = 0.026 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +2 Query: 398 KQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELA 505 ++++ R +T +Q LEK F +YL+ + R+E+A Sbjct: 7 ERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 42 >M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone H55. ). Length = 86 Score = 37.1 bits (82), Expect = 2e-04 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +1 Query: 511 LGLTDTQVKTWYQNRRTKWKRQ 576 L LT+ Q+K W+QNRR KWK++ Sbjct: 45 LCLTERQIKIWFQNRRMKWKKE 66 Score = 31.1 bits (67), Expect = 0.011 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = +2 Query: 404 RKARTAFTDHQLQTLEKSFERQKYLSVQDRMELA 505 ++ RT++T +Q LEK F +YL+ + R+E+A Sbjct: 9 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIA 42 >AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein protein. Length = 352 Score = 37.1 bits (82), Expect = 2e-04 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +1 Query: 511 LGLTDTQVKTWYQNRRTKWKRQ 576 L LT+ Q+K W+QNRR KWK++ Sbjct: 307 LCLTERQIKIWFQNRRMKWKKE 328 Score = 29.9 bits (64), Expect = 0.026 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +2 Query: 398 KQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELA 505 ++++ R +T +Q LEK F +YL+ + R+E+A Sbjct: 269 ERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIA 304 >M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone E30. ). Length = 109 Score = 35.5 bits (78), Expect = 5e-04 Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 4/37 (10%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKR----QTAVGLELLAE 606 +LGLT+ Q+K W+QN+R K K+ + + L+L+A+ Sbjct: 56 DLGLTEAQIKIWFQNKRAKIKKASGQKNPLALQLMAQ 92 Score = 31.1 bits (67), Expect = 0.011 Identities = 12/36 (33%), Positives = 24/36 (66%) Frame = +2 Query: 398 KQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELA 505 ++++ RTAF+ QL L++ F +YL+ + R +L+ Sbjct: 19 EEKRPRTAFSAEQLARLKREFAENRYLTERRRQQLS 54 >M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone E60. ). Length = 109 Score = 33.5 bits (73), Expect = 0.002 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 4/37 (10%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKR----QTAVGLELLAE 606 +LGL + Q+K W+QN+R K K+ + + L+L+A+ Sbjct: 56 DLGLNEAQIKIWFQNKRAKIKKASGQKNPLALQLMAQ 92 Score = 31.5 bits (68), Expect = 0.008 Identities = 12/36 (33%), Positives = 24/36 (66%) Frame = +2 Query: 398 KQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELA 505 ++++ RTAF+ QL L++ F +YL+ + R +L+ Sbjct: 19 EEKRPRTAFSGEQLARLKREFAENRYLTERRRQQLS 54 >M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone H15. ). Length = 74 Score = 31.9 bits (69), Expect = 0.006 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = +1 Query: 511 LGLTDTQVKTWYQNRRTKWKRQ 576 L LT+ Q+K W+QNRR K K++ Sbjct: 45 LCLTERQIKIWFQNRRMKLKKE 66 Score = 28.3 bits (60), Expect = 0.078 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +2 Query: 401 QRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELA 505 +R+ R +T Q LEK F YL+ + R+E+A Sbjct: 8 RRRGRQTYTRFQTLELEKEFHYNHYLTRRRRIEIA 42 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 24.6 bits (51), Expect = 0.96 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +3 Query: 516 PDRHPSQNLVPEPTDKMETSNGS 584 P+R P+ +L P P+D+ +GS Sbjct: 1369 PERVPTVDLSPSPSDRGRNDDGS 1391 >X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor protein. Length = 168 Score = 21.8 bits (44), Expect = 6.8 Identities = 9/23 (39%), Positives = 11/23 (47%) Frame = -3 Query: 387 PDPSPPQLLLDTSSESSFTPGES 319 P P PP L +ES PG + Sbjct: 79 PQPRPPHPRLRREAESEAEPGNN 101 >AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera ORF for hypotheticalprotein. ). Length = 998 Score = 21.8 bits (44), Expect = 6.8 Identities = 8/17 (47%), Positives = 14/17 (82%) Frame = -2 Query: 604 LLEAPSRLPFDVSILSV 554 L +AP+++P DV +L+V Sbjct: 172 LSKAPAQIPVDVLVLTV 188 >EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. Length = 570 Score = 21.4 bits (43), Expect = 9.0 Identities = 6/10 (60%), Positives = 8/10 (80%) Frame = -2 Query: 298 GVPMCAKIPW 269 G P+C +IPW Sbjct: 328 GNPICVQIPW 337 >DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 21.4 bits (43), Expect = 9.0 Identities = 10/22 (45%), Positives = 10/22 (45%) Frame = -2 Query: 106 GTSLAPSAPALRTDGHRTRHIT 41 G S P R GHR RH T Sbjct: 178 GISNEVELPQFRVLGHRQRHST 199 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 21.4 bits (43), Expect = 9.0 Identities = 8/25 (32%), Positives = 15/25 (60%) Frame = -1 Query: 515 PSSQPAPSDPVR*GTFVVRRTSQGS 441 P++ P+P++ T + R+ QGS Sbjct: 741 PNASPSPAEQCASTTTITARSPQGS 765 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 170,414 Number of Sequences: 438 Number of extensions: 3383 Number of successful extensions: 27 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 27 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 22535775 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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