BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021927 (725 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g36740.1 68417.m05213 homeobox-leucine zipper family protein ... 37 0.016 At2g18550.1 68415.m02161 homeobox-leucine zipper family protein ... 36 0.021 At5g66700.1 68418.m08408 homeobox-leucine zipper family protein ... 36 0.036 At5g46880.1 68418.m05777 homeobox-leucine zipper family protein ... 36 0.036 At4g40060.1 68417.m05672 homeobox-leucine zipper protein 16 (HB-... 35 0.048 At4g17460.1 68417.m02612 homeobox-leucine zipper protein 1 (HAT1... 35 0.048 At2g22430.1 68415.m02660 homeobox-leucine zipper protein 6 (HB-6... 35 0.048 At5g65310.1 68418.m08216 homeobox-leucine zipper protein 5 (HB-5... 35 0.063 At5g03790.1 68418.m00346 homeobox-leucine zipper family protein ... 35 0.063 At1g73360.1 68414.m08491 homeobox-leucine zipper family protein ... 35 0.063 At1g17920.1 68414.m02218 homeobox-leucine zipper family protein ... 34 0.083 At2g36610.1 68415.m04488 homeobox-leucine zipper family protein ... 34 0.11 At4g16780.1 68417.m02535 homeobox-leucine zipper protein 4 (HAT4... 33 0.15 At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-... 33 0.15 At3g01470.1 68416.m00071 homeobox-leucine zipper protein 5 (HAT5... 33 0.15 At2g46680.1 68415.m05825 homeobox-leucine zipper protein 7 (HB-7... 33 0.15 At5g47370.1 68418.m05838 homeobox-leucine zipper protein 2 (HAT2... 33 0.25 At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7... 32 0.34 At4g17710.1 68417.m02645 homeobox-leucine zipper family protein ... 32 0.34 At1g69780.1 68414.m08029 homeobox-leucine zipper protein 13 (HB-... 32 0.34 At2g32370.1 68415.m03956 homeobox-leucine zipper family protein ... 32 0.45 At1g79840.1 68414.m09327 homeobox-leucine zipper protein 10 (HB-... 32 0.45 At5g52170.1 68418.m06476 homeobox-leucine zipper family protein ... 31 0.59 At4g37790.1 68417.m05348 homeobox-leucine zipper protein 22 (HAT... 31 0.59 At4g21750.1 68417.m03148 L1 specific homeobox gene (ML1) / ovule... 31 0.59 At3g01220.1 68416.m00028 homeobox-leucine zipper protein, putati... 31 0.59 At2g22800.1 68415.m02706 homeobox-leucine zipper protein 9 (HAT9... 31 0.59 At5g53980.1 68418.m06715 homeobox-leucine zipper family protein ... 31 0.78 At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT... 31 0.78 At3g60390.1 68416.m06754 homeobox-leucine zipper protein 3 (HAT3... 31 0.78 At4g04890.1 68417.m00712 homeobox-leucine zipper protein protode... 31 1.0 At3g61150.1 68416.m06843 homeobox-leucine zipper family protein ... 31 1.0 At2g44910.1 68415.m05590 homeobox-leucine zipper protein 4 (HB-4... 31 1.0 At1g27050.1 68414.m03298 homeobox-leucine zipper family protein ... 31 1.0 At1g34650.1 68414.m04309 homeobox-leucine zipper family protein ... 30 1.4 At3g03260.1 68416.m00322 homeobox-leucine zipper family protein ... 30 1.8 At1g05230.2 68414.m00529 homeobox-leucine zipper family protein ... 30 1.8 At1g05230.1 68414.m00528 homeobox-leucine zipper family protein ... 30 1.8 At5g17320.1 68418.m02029 homeobox-leucine zipper family protein ... 29 2.4 At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identica... 29 2.4 At1g28420.1 68414.m03494 homeobox transcription factor, putative... 29 2.4 At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative s... 29 3.1 At4g03250.1 68417.m00444 homeobox-leucine zipper family protein ... 29 4.1 At3g12840.1 68416.m01601 hypothetical protein 29 4.1 At1g20700.1 68414.m02594 homeobox-leucine zipper family protein ... 29 4.1 At1g77300.1 68414.m09002 SET domain-containing protein similar t... 28 5.5 At2g06050.2 68415.m00664 12-oxophytodienoate reductase (OPR3) / ... 28 7.2 At2g06050.1 68415.m00663 12-oxophytodienoate reductase (OPR3) / ... 28 7.2 At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putativ... 27 9.6 >At4g36740.1 68417.m05213 homeobox-leucine zipper family protein similar to CRHB7 (GP:3868841) {Ceratopteris richardii} and to homeotic protein VAHOX1 (PIR:T07734) [Lycopersicon esculentum] Length = 217 Score = 36.7 bits (81), Expect = 0.016 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 Query: 493 DGAGCELGLTDTQVKTWYQNRRTKWKRQ 576 D ELGL QV W+QNRR +WK + Sbjct: 84 DRLAAELGLDPRQVAVWFQNRRARWKNK 111 >At2g18550.1 68415.m02161 homeobox-leucine zipper family protein similar to CRHB6 (GI:3868839) [Ceratopteris richardii]; contains Pfam PF00046: Homeobox domain Length = 220 Score = 36.3 bits (80), Expect = 0.021 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 Query: 493 DGAGCELGLTDTQVKTWYQNRRTKWKRQ 576 D ELGL QV W+QNRR +WK + Sbjct: 89 DRLASELGLDPRQVAVWFQNRRARWKNK 116 >At5g66700.1 68418.m08408 homeobox-leucine zipper family protein similar to Homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (SP:Q02283) [Arabidopsis thaliana]; contains Pfam PF00046: Homeobox domain Length = 228 Score = 35.5 bits (78), Expect = 0.036 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576 ELGL QV W+QNRR +WK + Sbjct: 104 ELGLDPRQVAVWFQNRRARWKNK 126 >At5g46880.1 68418.m05777 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to HD-Zip homeo domain OCL4 protein GI:8920425 from [Zea mays]; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain Length = 820 Score = 35.5 bits (78), Expect = 0.036 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGN 615 ELGL QVK W+QNRRT+ K Q ++ A N Sbjct: 147 ELGLKPRQVKFWFQNRRTQMKAQQDRNENVMLRAEN 182 >At4g40060.1 68417.m05672 homeobox-leucine zipper protein 16 (HB-16) / HD-ZIP transcription factor 16 identical to homeodomain leucine-zipper protein ATHB-16 (GP:5668909|) {Arabidopsis thaliana} Length = 294 Score = 35.1 bits (77), Expect = 0.048 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK 570 ELGL QV W+QNRR +WK Sbjct: 92 ELGLQPRQVAVWFQNRRARWK 112 >At4g17460.1 68417.m02612 homeobox-leucine zipper protein 1 (HAT1) / HD-ZIP protein 1 identical to Homeobox-leucine zipper protein HAT1 (SP:P46600) [Arabidopsis thaliana] Length = 282 Score = 35.1 bits (77), Expect = 0.048 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600 +LGLT QV+ W+QNRR + K +QT V E L Sbjct: 168 KLGLTARQVEVWFQNRRARTKLKQTEVDCEYL 199 >At2g22430.1 68415.m02660 homeobox-leucine zipper protein 6 (HB-6) / HD-ZIP transcription factor 6 identical to homeobox-leucine zipper protein ATHB-6 (HD-ZIP protein ATHB-6) (SP:P46668) [Arabidopsis thaliana] Length = 311 Score = 35.1 bits (77), Expect = 0.048 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK 570 ELGL QV W+QNRR +WK Sbjct: 95 ELGLQPRQVAVWFQNRRARWK 115 >At5g65310.1 68418.m08216 homeobox-leucine zipper protein 5 (HB-5) / HD-ZIP transcription factor 5 identical to homeobox-leucine zipper protein ATHB-5 (HD-ZIP protein ATHB-5) (SP:P46667) [Arabidopsis thaliana] Length = 312 Score = 34.7 bits (76), Expect = 0.063 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK 570 ELGL QV W+QNRR +WK Sbjct: 105 ELGLQPRQVAIWFQNRRARWK 125 >At5g03790.1 68418.m00346 homeobox-leucine zipper family protein similar to homeobox-leucine zipper protein Athb-7 (SP:P46897) [Arabidopsis thaliana]; contains Pfam PF00046: Homeobox domain Length = 236 Score = 34.7 bits (76), Expect = 0.063 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK 570 ELGL Q+ W+QNRR +WK Sbjct: 111 ELGLQPRQIAVWFQNRRARWK 131 >At1g73360.1 68414.m08491 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein protodermal factor2 (GI:14276060) [Arabidopsis thaliana]; similar to homeobox protein GI:1173621 from [ Phalaenopsis sp.] Length = 722 Score = 34.7 bits (76), Expect = 0.063 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576 ELGL Q+K W+QNRRT+ K Q Sbjct: 68 ELGLAPRQIKFWFQNRRTQLKAQ 90 >At1g17920.1 68414.m02218 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to A20 (GI:1881536) [Arabidopsis thaliana]; similar to homeobox protein GI:1173622 from [Phalaenopsis sp. SM9108] Length = 687 Score = 34.3 bits (75), Expect = 0.083 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576 ELGL Q+K W+QNRRT+ K Q Sbjct: 57 ELGLAPRQIKFWFQNRRTQKKAQ 79 >At2g36610.1 68415.m04488 homeobox-leucine zipper family protein similar to homeobox protein PpHB8 (GP:7415628) [Physcomitrella patens]; contains PfamPF00046: Homeobox domain Length = 185 Score = 33.9 bits (74), Expect = 0.11 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576 ELGL Q+ W+QNR+ +WK + Sbjct: 112 ELGLQPRQIAVWFQNRKARWKNK 134 >At4g16780.1 68417.m02535 homeobox-leucine zipper protein 4 (HAT4) / HD-ZIP protein 4 SP|Q05466|HAT4_ARATH Homeobox-leucine zipper protein HAT4 (HD-ZIP protein 4) (SP:Q05466) [Arabidopsis thaliana] (HD-ZIP homeotic protein Athb-2 Length = 284 Score = 33.5 bits (73), Expect = 0.15 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600 +LGL QV+ W+QNRR + K +QT V E L Sbjct: 162 QLGLRARQVEVWFQNRRARTKLKQTEVDCEFL 193 >At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-12) / HD-ZIP transcription factor 12 identical to homeobox-leucine zipper protein ATHB-12 (GI:6899887) [Arabidopsis thaliana] Length = 235 Score = 33.5 bits (73), Expect = 0.15 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK 570 ELGL QV W+QN+R +WK Sbjct: 63 ELGLQPRQVAIWFQNKRARWK 83 >At3g01470.1 68416.m00071 homeobox-leucine zipper protein 5 (HAT5) / HD-ZIP protein 5 / HD-ZIP protein (HB-1) identical to homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (HD-ZIP protein ATHB-1) GB:Q02283 [Arabidopsis thaliana] Length = 272 Score = 33.5 bits (73), Expect = 0.15 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK 570 +LGL QV W+QNRR +WK Sbjct: 101 KLGLQPRQVAVWFQNRRARWK 121 >At2g46680.1 68415.m05825 homeobox-leucine zipper protein 7 (HB-7) / HD-ZIP transcription factor 7 identical to homeobox-leucine zipper protein ATHB-7 (HD-ZIP protein ATHB-7) (SP:P46897) [Arabidopsis thaliana]; Length = 258 Score = 33.5 bits (73), Expect = 0.15 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK 570 ELGL QV W+QN+R +WK Sbjct: 65 ELGLQPRQVAIWFQNKRARWK 85 >At5g47370.1 68418.m05838 homeobox-leucine zipper protein 2 (HAT2) / HD-ZIP protein 2 identical to homeobox-leucine zipper protein HAT2 (HD-ZIP protein 2) [Arabidopsis thaliana] SP:P46601; contains Pfam profiles PF04618: HD-ZIP protein N terminus, PF02183: Homeobox associated leucine zipper, PF00046: Homeobox domain Length = 283 Score = 32.7 bits (71), Expect = 0.25 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600 +L LT QV+ W+QNRR + K +QT V E L Sbjct: 163 KLNLTARQVEVWFQNRRARTKLKQTEVDCEYL 194 >At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7) / HD-ZIP protein 7 / HD-ZIP protein (HB-3) identical to homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7) (HD-ZIP protein ATHB-3) (SP:Q00466) [Arabidopsis thaliana] Length = 314 Score = 32.3 bits (70), Expect = 0.34 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +1 Query: 511 LGLTDTQVKTWYQNRRTKWK 570 LGL Q+ W+QNRR +WK Sbjct: 149 LGLQPRQIAIWFQNRRARWK 168 >At4g17710.1 68417.m02645 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to HD-Zip homeo domain OCL4 protein (GI:8920425) [Zea mays]; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain Length = 709 Score = 32.3 bits (70), Expect = 0.34 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576 +LGL+ QVK W+QN+RT+ K Q Sbjct: 124 KLGLSPIQVKFWFQNKRTQIKAQ 146 >At1g69780.1 68414.m08029 homeobox-leucine zipper protein 13 (HB-13) / HD-ZIP transcription factor 13 identical to homeobox gene 13 protein (GP:12325190) [Arabidopsis thaliana] Length = 294 Score = 32.3 bits (70), Expect = 0.34 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +1 Query: 511 LGLTDTQVKTWYQNRRTKWK 570 LGL Q+ W+QNRR +WK Sbjct: 119 LGLQPRQIAIWFQNRRARWK 138 >At2g32370.1 68415.m03956 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to HD-Zip homeo domain OCL5 protein (GI:8920427) [Zea mays]; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain Length = 721 Score = 31.9 bits (69), Expect = 0.45 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576 +LGL Q+K W+QN+RT+ K Q Sbjct: 104 QLGLDPVQIKFWFQNKRTQNKNQ 126 >At1g79840.1 68414.m09327 homeobox-leucine zipper protein 10 (HB-10) / HD-ZIP transcription factor 10 / homeobox protein (GLABRA2) identical to homeobox protein (GLABRA2) (homeobox-leucine zipper protein ATHB-10) (HD-ZIP protein ATHB-10) GB:P46607 [Arabidopsis thaliana] Length = 747 Score = 31.9 bits (69), Expect = 0.45 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK 570 +LGL QVK W+QNRRT+ K Sbjct: 137 QLGLAPRQVKFWFQNRRTQIK 157 >At5g52170.1 68418.m06476 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to Anthocyaninless2 (ANL2) (GP:5702094) [Arabidopsis thaliana]; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain Length = 682 Score = 31.5 bits (68), Expect = 0.59 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 502 GCELGLTDTQVKTWYQNRRTKWKRQ 576 G +L L Q+K W+QNRRT+ K Q Sbjct: 91 GKKLTLESKQIKFWFQNRRTQMKTQ 115 >At4g37790.1 68417.m05348 homeobox-leucine zipper protein 22 (HAT22) / HD-ZIP protein 22 identical to homeobox-leucine zipper protein HAT22 (HD-ZIP protein 22) (SP:P46604) [Arabidopsis thaliana] Length = 278 Score = 31.5 bits (68), Expect = 0.59 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600 +L L QV+ W+QNRR + K +QT V E L Sbjct: 159 QLNLRPRQVEVWFQNRRARTKLKQTEVDCEFL 190 >At4g21750.1 68417.m03148 L1 specific homeobox gene (ML1) / ovule-specific homeobox protein A20 nearly identical to meristem L1 layer homeobox protein A20 (AtML1) [Arabidopsis thaliana] GI:1881536, protodermal factor2 (PDF2) [Arabidopsis thaliana] GI:14276060 Length = 762 Score = 31.5 bits (68), Expect = 0.59 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576 EL L QVK W+QN+RT+ K Q Sbjct: 98 ELSLEPLQVKFWFQNKRTQMKAQ 120 >At3g01220.1 68416.m00028 homeobox-leucine zipper protein, putative / HD-ZIP transcription factor, putative similar to homeobox-leucine zipper protein, HAT7 (GB:Q00466) [Arabidopsis thaliana] Length = 286 Score = 31.5 bits (68), Expect = 0.59 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +1 Query: 511 LGLTDTQVKTWYQNRRTKWK 570 LG+ Q+ W+QNRR +WK Sbjct: 121 LGMQPRQIAIWFQNRRARWK 140 >At2g22800.1 68415.m02706 homeobox-leucine zipper protein 9 (HAT9) / HD-ZIP protein 9 identical to GB:U09341 Length = 274 Score = 31.5 bits (68), Expect = 0.59 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600 +L L QV+ W+QNRR + K +QT V E L Sbjct: 146 QLNLRPRQVEVWFQNRRARTKLKQTEVDCEFL 177 >At5g53980.1 68418.m06715 homeobox-leucine zipper family protein contains Pfam PF00046: Homeobox domain; similar to homeobox protein PpHB5 (GI:7415622) [Physcomitrella patens] Length = 156 Score = 31.1 bits (67), Expect = 0.78 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKRQT 579 +LGL QV W+QN+R ++K Q+ Sbjct: 44 QLGLPQRQVAVWFQNKRARFKTQS 67 >At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT14) / HD-ZIP protein 14 contains similarity to homeodomain leucine zipper protein Length = 336 Score = 31.1 bits (67), Expect = 0.78 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600 +L L QV+ W+QNRR + K +QT V E L Sbjct: 223 QLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL 254 >At3g60390.1 68416.m06754 homeobox-leucine zipper protein 3 (HAT3) / HD-ZIP protein 3 identical to Homeobox-leucine zipper protein HAT3 (SP:P46602) [Arabidopsis thaliana] Length = 315 Score = 31.1 bits (67), Expect = 0.78 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600 +L L QV+ W+QNRR + K +QT V E L Sbjct: 195 QLNLRTRQVEVWFQNRRARTKLKQTEVDCEYL 226 >At4g04890.1 68417.m00712 homeobox-leucine zipper protein protodermal factor 2 (PDF2) identical to GP|14276060| protodermal factor2 (GI:14276060) Length = 743 Score = 30.7 bits (66), Expect = 1.0 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKRQT 579 +L L QVK W+QN+RT+ K Q+ Sbjct: 98 DLNLEPLQVKFWFQNKRTQMKAQS 121 >At3g61150.1 68416.m06843 homeobox-leucine zipper family protein / homeodomain GLABRA2 like protein 1 (HD-GL2-1) similar to Anthocyaninless2 (ANL2) (GP:5702094) Arabidopsis thaliana, EMBL:AF077335 Length = 808 Score = 30.7 bits (66), Expect = 1.0 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +1 Query: 511 LGLTDTQVKTWYQNRRTKWKRQ 576 L L QVK W+QNRRT+ K Q Sbjct: 147 LNLDPRQVKFWFQNRRTQMKTQ 168 >At2g44910.1 68415.m05590 homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein 4 identical to Homeobox-leucine zipper protein ATHB-4 (HD-ZIP protein ATHB-4) (SP:P92953) [Arabidopsis thaliana] Length = 318 Score = 30.7 bits (66), Expect = 1.0 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600 +L L QV+ W+QNRR + K +QT V E L Sbjct: 196 QLNLRARQVEVWFQNRRARTKLKQTEVDCEYL 227 >At1g27050.1 68414.m03298 homeobox-leucine zipper family protein contains Pfam profile:PF00046 Homeobox domain and Pfam profile:PF00076 RNA recognition motif Length = 444 Score = 30.7 bits (66), Expect = 1.0 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK 570 +LGL +QV W+QNRR ++K Sbjct: 50 KLGLQPSQVAVWFQNRRARYK 70 >At1g34650.1 68414.m04309 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to homeobox 1 (GP:12002853) {Picea abies}; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain Length = 708 Score = 30.3 bits (65), Expect = 1.4 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 502 GCELGLTDTQVKTWYQNRRTK 564 G EL L Q+K W+QNRRT+ Sbjct: 50 GNELNLKHKQIKFWFQNRRTQ 70 >At3g03260.1 68416.m00322 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20, GB:CAB36819 Length = 699 Score = 29.9 bits (64), Expect = 1.8 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGN 615 EL L Q+K W+QN+RT+ K Q +L N Sbjct: 59 ELKLEPDQIKFWFQNKRTQSKTQEDRSTNVLLRGEN 94 >At1g05230.2 68414.m00529 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to homeobox 1 (GP:12002853) {Picea abies}; Strong similarity to Phalaenopsis homeobox protein (gb|U34743) Length = 721 Score = 29.9 bits (64), Expect = 1.8 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK 570 EL L QVK W+QN+RT+ K Sbjct: 100 ELNLEPLQVKFWFQNKRTQMK 120 >At1g05230.1 68414.m00528 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to homeobox 1 (GP:12002853) {Picea abies}; Strong similarity to Phalaenopsis homeobox protein (gb|U34743) Length = 721 Score = 29.9 bits (64), Expect = 1.8 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWK 570 EL L QVK W+QN+RT+ K Sbjct: 100 ELNLEPLQVKFWFQNKRTQMK 120 >At5g17320.1 68418.m02029 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to Roc1 (GI:1907210) [Oryza sativa]; contains Pfam PF00046: Homeobox domain and Pfam PF01852: START domain Length = 718 Score = 29.5 bits (63), Expect = 2.4 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +1 Query: 502 GCELGLTDTQVKTWYQNRRTKWK 570 G EL L Q+K W+QN+RT+ K Sbjct: 60 GEELNLKPKQIKFWFQNKRTQAK 82 >At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identical to Anthocyaninless2 [Arabidopsis thaliana] GI:5702094 Length = 802 Score = 29.5 bits (63), Expect = 2.4 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +1 Query: 511 LGLTDTQVKTWYQNRRTKWKRQ 576 L L QVK W+QNRRT+ K Q Sbjct: 171 LCLETRQVKFWFQNRRTQMKTQ 192 >At1g28420.1 68414.m03494 homeobox transcription factor, putative similar to homeobox transcription factor Hox7 GI:19486 [Lycopersicon peruvianum] Length = 1703 Score = 29.5 bits (63), Expect = 2.4 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = +2 Query: 395 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELA 505 K +R+ +T F QL+TLEK + +KY S R EL+ Sbjct: 38 KPKRQMKTPF---QLETLEKVYSEEKYPSEATRAELS 71 >At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative similar to SP|P04051 DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6) {Saccharomyces cerevisiae}; contains InterPro accession IPR000722: RNA polymerase, alpha subunit Length = 1328 Score = 29.1 bits (62), Expect = 3.1 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -3 Query: 456 DFSRVCS*WSVNAVRAFLCFLARPDPSPPQLLLDTS 349 D SRVC+ V ++R F+ L SPPQ+L S Sbjct: 936 DKSRVCTDAFVKSLREFVSLLGVKSASPPQVLYKAS 971 >At4g03250.1 68417.m00444 homeobox-leucine zipper family protein similar to homeobox transcription factor Hox7 [Lycopersicon peruvianum] GI:19486; contains Pfam PF00046: Homeobox domain Length = 476 Score = 28.7 bits (61), Expect = 4.1 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 Query: 508 ELGLTDTQVKTWYQNRRTKWKR 573 E+GLT+ QV W+ +RR K KR Sbjct: 24 EVGLTEKQVSGWFCHRRLKDKR 45 >At3g12840.1 68416.m01601 hypothetical protein Length = 92 Score = 28.7 bits (61), Expect = 4.1 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Frame = +2 Query: 407 KARTAFTDHQLQTLEKSFERQKYL-SVQDRMEL 502 K R+ F+D + Q + + ++QK L SVQ R EL Sbjct: 23 KQRSVFSDSEFQQISRCIQKQKQLESVQMRQEL 55 >At1g20700.1 68414.m02594 homeobox-leucine zipper family protein strong similarity to homeodomain protein PALE-2 (GI:20152544) [Arabidopsis thaliana]; contains Pfam profile: PF00046 homeobox domain Length = 211 Score = 28.7 bits (61), Expect = 4.1 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +1 Query: 517 LTDTQVKTWYQNRRTKWKRQ 576 +T+T V W+QNRR + KR+ Sbjct: 135 ITETNVYNWFQNRRARSKRK 154 >At1g77300.1 68414.m09002 SET domain-containing protein similar to huntingtin interacting protein 1 [Homo sapiens] GI:12697196; contains Pfam profile PF00856: SET domain Length = 1759 Score = 28.3 bits (60), Expect = 5.5 Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Frame = -1 Query: 350 HQNHLSHLVNQWLICHCR-SPDVR 282 H+N S +++ ++CHC+ SPD R Sbjct: 965 HRNRKSQTIDEIMVCHCKPSPDGR 988 >At2g06050.2 68415.m00664 12-oxophytodienoate reductase (OPR3) / delayed dehiscence1 (DDE1) nearly identical to DELAYED DEHISCENCE1 [GI:7688991] and to OPR3 [GI:10242314]; contains Pfam profile PF00724:oxidoreductase, FAD/FMN-binding; identical to cDNA OPDA-reductase homolog GI:5059114 Length = 391 Score = 27.9 bits (59), Expect = 7.2 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 84 ALGASEVPRVGRGWCAPALDAV 149 AL ASE+PRV +C AL+A+ Sbjct: 155 ALEASEIPRVVEDYCLSALNAI 176 >At2g06050.1 68415.m00663 12-oxophytodienoate reductase (OPR3) / delayed dehiscence1 (DDE1) nearly identical to DELAYED DEHISCENCE1 [GI:7688991] and to OPR3 [GI:10242314]; contains Pfam profile PF00724:oxidoreductase, FAD/FMN-binding; identical to cDNA OPDA-reductase homolog GI:5059114 Length = 391 Score = 27.9 bits (59), Expect = 7.2 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 84 ALGASEVPRVGRGWCAPALDAV 149 AL ASE+PRV +C AL+A+ Sbjct: 155 ALEASEIPRVVEDYCLSALNAI 176 >At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putative (UBP16) similar to ubiquitin-specific protease 16 GI:11993477 [Arabidopsis thaliana] Length = 1008 Score = 27.5 bits (58), Expect = 9.6 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = -3 Query: 411 AFLCFLARPDPSPPQLLLDTSSESS 337 A++ F AR P+PP+L + T +E+S Sbjct: 839 AYMLFYARCTPTPPRLAVCTKTEAS 863 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,513,553 Number of Sequences: 28952 Number of extensions: 263771 Number of successful extensions: 919 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 882 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 919 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1584903024 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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