Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021927
(725 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36740.1 68417.m05213 homeobox-leucine zipper family protein ... 37 0.016
At2g18550.1 68415.m02161 homeobox-leucine zipper family protein ... 36 0.021
At5g66700.1 68418.m08408 homeobox-leucine zipper family protein ... 36 0.036
At5g46880.1 68418.m05777 homeobox-leucine zipper family protein ... 36 0.036
At4g40060.1 68417.m05672 homeobox-leucine zipper protein 16 (HB-... 35 0.048
At4g17460.1 68417.m02612 homeobox-leucine zipper protein 1 (HAT1... 35 0.048
At2g22430.1 68415.m02660 homeobox-leucine zipper protein 6 (HB-6... 35 0.048
At5g65310.1 68418.m08216 homeobox-leucine zipper protein 5 (HB-5... 35 0.063
At5g03790.1 68418.m00346 homeobox-leucine zipper family protein ... 35 0.063
At1g73360.1 68414.m08491 homeobox-leucine zipper family protein ... 35 0.063
At1g17920.1 68414.m02218 homeobox-leucine zipper family protein ... 34 0.083
At2g36610.1 68415.m04488 homeobox-leucine zipper family protein ... 34 0.11
At4g16780.1 68417.m02535 homeobox-leucine zipper protein 4 (HAT4... 33 0.15
At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-... 33 0.15
At3g01470.1 68416.m00071 homeobox-leucine zipper protein 5 (HAT5... 33 0.15
At2g46680.1 68415.m05825 homeobox-leucine zipper protein 7 (HB-7... 33 0.15
At5g47370.1 68418.m05838 homeobox-leucine zipper protein 2 (HAT2... 33 0.25
At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7... 32 0.34
At4g17710.1 68417.m02645 homeobox-leucine zipper family protein ... 32 0.34
At1g69780.1 68414.m08029 homeobox-leucine zipper protein 13 (HB-... 32 0.34
At2g32370.1 68415.m03956 homeobox-leucine zipper family protein ... 32 0.45
At1g79840.1 68414.m09327 homeobox-leucine zipper protein 10 (HB-... 32 0.45
At5g52170.1 68418.m06476 homeobox-leucine zipper family protein ... 31 0.59
At4g37790.1 68417.m05348 homeobox-leucine zipper protein 22 (HAT... 31 0.59
At4g21750.1 68417.m03148 L1 specific homeobox gene (ML1) / ovule... 31 0.59
At3g01220.1 68416.m00028 homeobox-leucine zipper protein, putati... 31 0.59
At2g22800.1 68415.m02706 homeobox-leucine zipper protein 9 (HAT9... 31 0.59
At5g53980.1 68418.m06715 homeobox-leucine zipper family protein ... 31 0.78
At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT... 31 0.78
At3g60390.1 68416.m06754 homeobox-leucine zipper protein 3 (HAT3... 31 0.78
At4g04890.1 68417.m00712 homeobox-leucine zipper protein protode... 31 1.0
At3g61150.1 68416.m06843 homeobox-leucine zipper family protein ... 31 1.0
At2g44910.1 68415.m05590 homeobox-leucine zipper protein 4 (HB-4... 31 1.0
At1g27050.1 68414.m03298 homeobox-leucine zipper family protein ... 31 1.0
At1g34650.1 68414.m04309 homeobox-leucine zipper family protein ... 30 1.4
At3g03260.1 68416.m00322 homeobox-leucine zipper family protein ... 30 1.8
At1g05230.2 68414.m00529 homeobox-leucine zipper family protein ... 30 1.8
At1g05230.1 68414.m00528 homeobox-leucine zipper family protein ... 30 1.8
At5g17320.1 68418.m02029 homeobox-leucine zipper family protein ... 29 2.4
At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identica... 29 2.4
At1g28420.1 68414.m03494 homeobox transcription factor, putative... 29 2.4
At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative s... 29 3.1
At4g03250.1 68417.m00444 homeobox-leucine zipper family protein ... 29 4.1
At3g12840.1 68416.m01601 hypothetical protein 29 4.1
At1g20700.1 68414.m02594 homeobox-leucine zipper family protein ... 29 4.1
At1g77300.1 68414.m09002 SET domain-containing protein similar t... 28 5.5
At2g06050.2 68415.m00664 12-oxophytodienoate reductase (OPR3) / ... 28 7.2
At2g06050.1 68415.m00663 12-oxophytodienoate reductase (OPR3) / ... 28 7.2
At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putativ... 27 9.6
>At4g36740.1 68417.m05213 homeobox-leucine zipper family protein
similar to CRHB7 (GP:3868841) {Ceratopteris richardii}
and to homeotic protein VAHOX1 (PIR:T07734)
[Lycopersicon esculentum]
Length = 217
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 493 DGAGCELGLTDTQVKTWYQNRRTKWKRQ 576
D ELGL QV W+QNRR +WK +
Sbjct: 84 DRLAAELGLDPRQVAVWFQNRRARWKNK 111
>At2g18550.1 68415.m02161 homeobox-leucine zipper family protein
similar to CRHB6 (GI:3868839) [Ceratopteris richardii];
contains Pfam PF00046: Homeobox domain
Length = 220
Score = 36.3 bits (80), Expect = 0.021
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 493 DGAGCELGLTDTQVKTWYQNRRTKWKRQ 576
D ELGL QV W+QNRR +WK +
Sbjct: 89 DRLASELGLDPRQVAVWFQNRRARWKNK 116
>At5g66700.1 68418.m08408 homeobox-leucine zipper family protein
similar to Homeobox-leucine zipper protein HAT5 (HD-ZIP
protein 5) (SP:Q02283) [Arabidopsis thaliana]; contains
Pfam PF00046: Homeobox domain
Length = 228
Score = 35.5 bits (78), Expect = 0.036
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576
ELGL QV W+QNRR +WK +
Sbjct: 104 ELGLDPRQVAVWFQNRRARWKNK 126
>At5g46880.1 68418.m05777 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
HD-Zip homeo domain OCL4 protein GI:8920425 from [Zea
mays]; contains Pfam PF00046: Homeobox domain and Pfam
PF01852: START domain
Length = 820
Score = 35.5 bits (78), Expect = 0.036
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGN 615
ELGL QVK W+QNRRT+ K Q ++ A N
Sbjct: 147 ELGLKPRQVKFWFQNRRTQMKAQQDRNENVMLRAEN 182
>At4g40060.1 68417.m05672 homeobox-leucine zipper protein 16 (HB-16)
/ HD-ZIP transcription factor 16 identical to
homeodomain leucine-zipper protein ATHB-16 (GP:5668909|)
{Arabidopsis thaliana}
Length = 294
Score = 35.1 bits (77), Expect = 0.048
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK 570
ELGL QV W+QNRR +WK
Sbjct: 92 ELGLQPRQVAVWFQNRRARWK 112
>At4g17460.1 68417.m02612 homeobox-leucine zipper protein 1 (HAT1) /
HD-ZIP protein 1 identical to Homeobox-leucine zipper
protein HAT1 (SP:P46600) [Arabidopsis thaliana]
Length = 282
Score = 35.1 bits (77), Expect = 0.048
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600
+LGLT QV+ W+QNRR + K +QT V E L
Sbjct: 168 KLGLTARQVEVWFQNRRARTKLKQTEVDCEYL 199
>At2g22430.1 68415.m02660 homeobox-leucine zipper protein 6 (HB-6) /
HD-ZIP transcription factor 6 identical to
homeobox-leucine zipper protein ATHB-6 (HD-ZIP protein
ATHB-6) (SP:P46668) [Arabidopsis thaliana]
Length = 311
Score = 35.1 bits (77), Expect = 0.048
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK 570
ELGL QV W+QNRR +WK
Sbjct: 95 ELGLQPRQVAVWFQNRRARWK 115
>At5g65310.1 68418.m08216 homeobox-leucine zipper protein 5 (HB-5) /
HD-ZIP transcription factor 5 identical to
homeobox-leucine zipper protein ATHB-5 (HD-ZIP protein
ATHB-5) (SP:P46667) [Arabidopsis thaliana]
Length = 312
Score = 34.7 bits (76), Expect = 0.063
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK 570
ELGL QV W+QNRR +WK
Sbjct: 105 ELGLQPRQVAIWFQNRRARWK 125
>At5g03790.1 68418.m00346 homeobox-leucine zipper family protein
similar to homeobox-leucine zipper protein Athb-7
(SP:P46897) [Arabidopsis thaliana]; contains Pfam
PF00046: Homeobox domain
Length = 236
Score = 34.7 bits (76), Expect = 0.063
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK 570
ELGL Q+ W+QNRR +WK
Sbjct: 111 ELGLQPRQIAVWFQNRRARWK 131
>At1g73360.1 68414.m08491 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein
protodermal factor2 (GI:14276060) [Arabidopsis
thaliana]; similar to homeobox protein GI:1173621 from [
Phalaenopsis sp.]
Length = 722
Score = 34.7 bits (76), Expect = 0.063
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576
ELGL Q+K W+QNRRT+ K Q
Sbjct: 68 ELGLAPRQIKFWFQNRRTQLKAQ 90
>At1g17920.1 68414.m02218 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
A20 (GI:1881536) [Arabidopsis thaliana]; similar to
homeobox protein GI:1173622 from [Phalaenopsis sp.
SM9108]
Length = 687
Score = 34.3 bits (75), Expect = 0.083
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576
ELGL Q+K W+QNRRT+ K Q
Sbjct: 57 ELGLAPRQIKFWFQNRRTQKKAQ 79
>At2g36610.1 68415.m04488 homeobox-leucine zipper family protein
similar to homeobox protein PpHB8 (GP:7415628)
[Physcomitrella patens]; contains PfamPF00046: Homeobox
domain
Length = 185
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576
ELGL Q+ W+QNR+ +WK +
Sbjct: 112 ELGLQPRQIAVWFQNRKARWKNK 134
>At4g16780.1 68417.m02535 homeobox-leucine zipper protein 4 (HAT4) /
HD-ZIP protein 4 SP|Q05466|HAT4_ARATH Homeobox-leucine
zipper protein HAT4 (HD-ZIP protein 4) (SP:Q05466)
[Arabidopsis thaliana] (HD-ZIP homeotic protein Athb-2
Length = 284
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600
+LGL QV+ W+QNRR + K +QT V E L
Sbjct: 162 QLGLRARQVEVWFQNRRARTKLKQTEVDCEFL 193
>At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-12)
/ HD-ZIP transcription factor 12 identical to
homeobox-leucine zipper protein ATHB-12 (GI:6899887)
[Arabidopsis thaliana]
Length = 235
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK 570
ELGL QV W+QN+R +WK
Sbjct: 63 ELGLQPRQVAIWFQNKRARWK 83
>At3g01470.1 68416.m00071 homeobox-leucine zipper protein 5 (HAT5) /
HD-ZIP protein 5 / HD-ZIP protein (HB-1) identical to
homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5)
(HD-ZIP protein ATHB-1) GB:Q02283 [Arabidopsis thaliana]
Length = 272
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK 570
+LGL QV W+QNRR +WK
Sbjct: 101 KLGLQPRQVAVWFQNRRARWK 121
>At2g46680.1 68415.m05825 homeobox-leucine zipper protein 7 (HB-7) /
HD-ZIP transcription factor 7 identical to
homeobox-leucine zipper protein ATHB-7 (HD-ZIP protein
ATHB-7) (SP:P46897) [Arabidopsis thaliana];
Length = 258
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK 570
ELGL QV W+QN+R +WK
Sbjct: 65 ELGLQPRQVAIWFQNKRARWK 85
>At5g47370.1 68418.m05838 homeobox-leucine zipper protein 2 (HAT2) /
HD-ZIP protein 2 identical to homeobox-leucine zipper
protein HAT2 (HD-ZIP protein 2) [Arabidopsis thaliana]
SP:P46601; contains Pfam profiles PF04618: HD-ZIP
protein N terminus, PF02183: Homeobox associated leucine
zipper, PF00046: Homeobox domain
Length = 283
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600
+L LT QV+ W+QNRR + K +QT V E L
Sbjct: 163 KLNLTARQVEVWFQNRRARTKLKQTEVDCEYL 194
>At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7) /
HD-ZIP protein 7 / HD-ZIP protein (HB-3) identical to
homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7)
(HD-ZIP protein ATHB-3) (SP:Q00466) [Arabidopsis
thaliana]
Length = 314
Score = 32.3 bits (70), Expect = 0.34
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 511 LGLTDTQVKTWYQNRRTKWK 570
LGL Q+ W+QNRR +WK
Sbjct: 149 LGLQPRQIAIWFQNRRARWK 168
>At4g17710.1 68417.m02645 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
HD-Zip homeo domain OCL4 protein (GI:8920425) [Zea
mays]; contains Pfam PF00046: Homeobox domain and Pfam
PF01852: START domain
Length = 709
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576
+LGL+ QVK W+QN+RT+ K Q
Sbjct: 124 KLGLSPIQVKFWFQNKRTQIKAQ 146
>At1g69780.1 68414.m08029 homeobox-leucine zipper protein 13 (HB-13)
/ HD-ZIP transcription factor 13 identical to homeobox
gene 13 protein (GP:12325190) [Arabidopsis thaliana]
Length = 294
Score = 32.3 bits (70), Expect = 0.34
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 511 LGLTDTQVKTWYQNRRTKWK 570
LGL Q+ W+QNRR +WK
Sbjct: 119 LGLQPRQIAIWFQNRRARWK 138
>At2g32370.1 68415.m03956 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
HD-Zip homeo domain OCL5 protein (GI:8920427) [Zea
mays]; contains Pfam PF00046: Homeobox domain and Pfam
PF01852: START domain
Length = 721
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576
+LGL Q+K W+QN+RT+ K Q
Sbjct: 104 QLGLDPVQIKFWFQNKRTQNKNQ 126
>At1g79840.1 68414.m09327 homeobox-leucine zipper protein 10 (HB-10)
/ HD-ZIP transcription factor 10 / homeobox protein
(GLABRA2) identical to homeobox protein (GLABRA2)
(homeobox-leucine zipper protein ATHB-10) (HD-ZIP
protein ATHB-10) GB:P46607 [Arabidopsis thaliana]
Length = 747
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK 570
+LGL QVK W+QNRRT+ K
Sbjct: 137 QLGLAPRQVKFWFQNRRTQIK 157
>At5g52170.1 68418.m06476 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
Anthocyaninless2 (ANL2) (GP:5702094) [Arabidopsis
thaliana]; contains Pfam PF00046: Homeobox domain and
Pfam PF01852: START domain
Length = 682
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 502 GCELGLTDTQVKTWYQNRRTKWKRQ 576
G +L L Q+K W+QNRRT+ K Q
Sbjct: 91 GKKLTLESKQIKFWFQNRRTQMKTQ 115
>At4g37790.1 68417.m05348 homeobox-leucine zipper protein 22 (HAT22)
/ HD-ZIP protein 22 identical to homeobox-leucine zipper
protein HAT22 (HD-ZIP protein 22) (SP:P46604)
[Arabidopsis thaliana]
Length = 278
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600
+L L QV+ W+QNRR + K +QT V E L
Sbjct: 159 QLNLRPRQVEVWFQNRRARTKLKQTEVDCEFL 190
>At4g21750.1 68417.m03148 L1 specific homeobox gene (ML1) /
ovule-specific homeobox protein A20 nearly identical to
meristem L1 layer homeobox protein A20 (AtML1)
[Arabidopsis thaliana] GI:1881536, protodermal factor2
(PDF2) [Arabidopsis thaliana] GI:14276060
Length = 762
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWKRQ 576
EL L QVK W+QN+RT+ K Q
Sbjct: 98 ELSLEPLQVKFWFQNKRTQMKAQ 120
>At3g01220.1 68416.m00028 homeobox-leucine zipper protein, putative
/ HD-ZIP transcription factor, putative similar to
homeobox-leucine zipper protein, HAT7 (GB:Q00466)
[Arabidopsis thaliana]
Length = 286
Score = 31.5 bits (68), Expect = 0.59
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 511 LGLTDTQVKTWYQNRRTKWK 570
LG+ Q+ W+QNRR +WK
Sbjct: 121 LGMQPRQIAIWFQNRRARWK 140
>At2g22800.1 68415.m02706 homeobox-leucine zipper protein 9 (HAT9) /
HD-ZIP protein 9 identical to GB:U09341
Length = 274
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600
+L L QV+ W+QNRR + K +QT V E L
Sbjct: 146 QLNLRPRQVEVWFQNRRARTKLKQTEVDCEFL 177
>At5g53980.1 68418.m06715 homeobox-leucine zipper family protein
contains Pfam PF00046: Homeobox domain; similar to
homeobox protein PpHB5 (GI:7415622) [Physcomitrella
patens]
Length = 156
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWKRQT 579
+LGL QV W+QN+R ++K Q+
Sbjct: 44 QLGLPQRQVAVWFQNKRARFKTQS 67
>At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT14)
/ HD-ZIP protein 14 contains similarity to homeodomain
leucine zipper protein
Length = 336
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600
+L L QV+ W+QNRR + K +QT V E L
Sbjct: 223 QLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL 254
>At3g60390.1 68416.m06754 homeobox-leucine zipper protein 3 (HAT3) /
HD-ZIP protein 3 identical to Homeobox-leucine zipper
protein HAT3 (SP:P46602) [Arabidopsis thaliana]
Length = 315
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600
+L L QV+ W+QNRR + K +QT V E L
Sbjct: 195 QLNLRTRQVEVWFQNRRARTKLKQTEVDCEYL 226
>At4g04890.1 68417.m00712 homeobox-leucine zipper protein
protodermal factor 2 (PDF2) identical to GP|14276060|
protodermal factor2 (GI:14276060)
Length = 743
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWKRQT 579
+L L QVK W+QN+RT+ K Q+
Sbjct: 98 DLNLEPLQVKFWFQNKRTQMKAQS 121
>At3g61150.1 68416.m06843 homeobox-leucine zipper family protein /
homeodomain GLABRA2 like protein 1 (HD-GL2-1) similar to
Anthocyaninless2 (ANL2) (GP:5702094) Arabidopsis
thaliana, EMBL:AF077335
Length = 808
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 511 LGLTDTQVKTWYQNRRTKWKRQ 576
L L QVK W+QNRRT+ K Q
Sbjct: 147 LNLDPRQVKFWFQNRRTQMKTQ 168
>At2g44910.1 68415.m05590 homeobox-leucine zipper protein 4 (HB-4) /
HD-ZIP protein 4 identical to Homeobox-leucine zipper
protein ATHB-4 (HD-ZIP protein ATHB-4) (SP:P92953)
[Arabidopsis thaliana]
Length = 318
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK-RQTAVGLELL 600
+L L QV+ W+QNRR + K +QT V E L
Sbjct: 196 QLNLRARQVEVWFQNRRARTKLKQTEVDCEYL 227
>At1g27050.1 68414.m03298 homeobox-leucine zipper family protein
contains Pfam profile:PF00046 Homeobox domain and Pfam
profile:PF00076 RNA recognition motif
Length = 444
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK 570
+LGL +QV W+QNRR ++K
Sbjct: 50 KLGLQPSQVAVWFQNRRARYK 70
>At1g34650.1 68414.m04309 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
homeobox 1 (GP:12002853) {Picea abies}; contains Pfam
PF00046: Homeobox domain and Pfam PF01852: START domain
Length = 708
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 502 GCELGLTDTQVKTWYQNRRTK 564
G EL L Q+K W+QNRRT+
Sbjct: 50 GNELNLKHKQIKFWFQNRRTQ 70
>At3g03260.1 68416.m00322 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
L1 specific homeobox gene ATML1/ovule-specific homeobox
protein A20, GB:CAB36819
Length = 699
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGN 615
EL L Q+K W+QN+RT+ K Q +L N
Sbjct: 59 ELKLEPDQIKFWFQNKRTQSKTQEDRSTNVLLRGEN 94
>At1g05230.2 68414.m00529 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
homeobox 1 (GP:12002853) {Picea abies}; Strong
similarity to Phalaenopsis homeobox protein (gb|U34743)
Length = 721
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK 570
EL L QVK W+QN+RT+ K
Sbjct: 100 ELNLEPLQVKFWFQNKRTQMK 120
>At1g05230.1 68414.m00528 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
homeobox 1 (GP:12002853) {Picea abies}; Strong
similarity to Phalaenopsis homeobox protein (gb|U34743)
Length = 721
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWK 570
EL L QVK W+QN+RT+ K
Sbjct: 100 ELNLEPLQVKFWFQNKRTQMK 120
>At5g17320.1 68418.m02029 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
Roc1 (GI:1907210) [Oryza sativa]; contains Pfam
PF00046: Homeobox domain and Pfam PF01852: START domain
Length = 718
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 502 GCELGLTDTQVKTWYQNRRTKWK 570
G EL L Q+K W+QN+RT+ K
Sbjct: 60 GEELNLKPKQIKFWFQNKRTQAK 82
>At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identical
to Anthocyaninless2 [Arabidopsis thaliana] GI:5702094
Length = 802
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 511 LGLTDTQVKTWYQNRRTKWKRQ 576
L L QVK W+QNRRT+ K Q
Sbjct: 171 LCLETRQVKFWFQNRRTQMKTQ 192
>At1g28420.1 68414.m03494 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7 GI:19486
[Lycopersicon peruvianum]
Length = 1703
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 395 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELA 505
K +R+ +T F QL+TLEK + +KY S R EL+
Sbjct: 38 KPKRQMKTPF---QLETLEKVYSEEKYPSEATRAELS 71
>At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative
similar to SP|P04051 DNA-directed RNA polymerase III
largest subunit (EC 2.7.7.6) {Saccharomyces cerevisiae};
contains InterPro accession IPR000722: RNA polymerase,
alpha subunit
Length = 1328
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 456 DFSRVCS*WSVNAVRAFLCFLARPDPSPPQLLLDTS 349
D SRVC+ V ++R F+ L SPPQ+L S
Sbjct: 936 DKSRVCTDAFVKSLREFVSLLGVKSASPPQVLYKAS 971
>At4g03250.1 68417.m00444 homeobox-leucine zipper family protein
similar to homeobox transcription factor Hox7
[Lycopersicon peruvianum] GI:19486; contains Pfam
PF00046: Homeobox domain
Length = 476
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 508 ELGLTDTQVKTWYQNRRTKWKR 573
E+GLT+ QV W+ +RR K KR
Sbjct: 24 EVGLTEKQVSGWFCHRRLKDKR 45
>At3g12840.1 68416.m01601 hypothetical protein
Length = 92
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 407 KARTAFTDHQLQTLEKSFERQKYL-SVQDRMEL 502
K R+ F+D + Q + + ++QK L SVQ R EL
Sbjct: 23 KQRSVFSDSEFQQISRCIQKQKQLESVQMRQEL 55
>At1g20700.1 68414.m02594 homeobox-leucine zipper family protein
strong similarity to homeodomain protein PALE-2
(GI:20152544) [Arabidopsis thaliana]; contains Pfam
profile: PF00046 homeobox domain
Length = 211
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 517 LTDTQVKTWYQNRRTKWKRQ 576
+T+T V W+QNRR + KR+
Sbjct: 135 ITETNVYNWFQNRRARSKRK 154
>At1g77300.1 68414.m09002 SET domain-containing protein similar to
huntingtin interacting protein 1 [Homo sapiens]
GI:12697196; contains Pfam profile PF00856: SET domain
Length = 1759
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 350 HQNHLSHLVNQWLICHCR-SPDVR 282
H+N S +++ ++CHC+ SPD R
Sbjct: 965 HRNRKSQTIDEIMVCHCKPSPDGR 988
>At2g06050.2 68415.m00664 12-oxophytodienoate reductase (OPR3) /
delayed dehiscence1 (DDE1) nearly identical to DELAYED
DEHISCENCE1 [GI:7688991] and to OPR3 [GI:10242314];
contains Pfam profile PF00724:oxidoreductase,
FAD/FMN-binding; identical to cDNA OPDA-reductase
homolog GI:5059114
Length = 391
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 84 ALGASEVPRVGRGWCAPALDAV 149
AL ASE+PRV +C AL+A+
Sbjct: 155 ALEASEIPRVVEDYCLSALNAI 176
>At2g06050.1 68415.m00663 12-oxophytodienoate reductase (OPR3) /
delayed dehiscence1 (DDE1) nearly identical to DELAYED
DEHISCENCE1 [GI:7688991] and to OPR3 [GI:10242314];
contains Pfam profile PF00724:oxidoreductase,
FAD/FMN-binding; identical to cDNA OPDA-reductase
homolog GI:5059114
Length = 391
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 84 ALGASEVPRVGRGWCAPALDAV 149
AL ASE+PRV +C AL+A+
Sbjct: 155 ALEASEIPRVVEDYCLSALNAI 176
>At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putative
(UBP16) similar to ubiquitin-specific protease 16
GI:11993477 [Arabidopsis thaliana]
Length = 1008
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 411 AFLCFLARPDPSPPQLLLDTSSESS 337
A++ F AR P+PP+L + T +E+S
Sbjct: 839 AYMLFYARCTPTPPRLAVCTKTEAS 863
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,513,553
Number of Sequences: 28952
Number of extensions: 263771
Number of successful extensions: 919
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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