Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021926X
         (452 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41538-3|AAP31431.1|  142|Caenorhabditis elegans Hypothetical pr...    28   3.7  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    28   3.7  
AC024806-3|AAP13749.1|  363|Caenorhabditis elegans Serpentine re...    27   4.8  
U97002-4|AAB52267.1|  630|Caenorhabditis elegans Hypothetical pr...    27   6.4  
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr...    27   6.4  
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr...    27   6.4  

>U41538-3|AAP31431.1|  142|Caenorhabditis elegans Hypothetical
           protein R04E5.8b protein.
          Length = 142

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 8/54 (14%)
 Frame = +1

Query: 43  SRQHH--PPKRHNGSPS------GNRHQQFPSQASTLPISGKFQAHDINNQQSQ 180
           +R HH  PP+ HN   +      GNRHQ             + Q HD N  QSQ
Sbjct: 71  NRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNRHQSQ 124


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical protein
            R04E5.8a protein.
          Length = 997

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 8/54 (14%)
 Frame = +1

Query: 43   SRQHH--PPKRHNGSPS------GNRHQQFPSQASTLPISGKFQAHDINNQQSQ 180
            +R HH  PP+ HN   +      GNRHQ             + Q HD N  QSQ
Sbjct: 915  NRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNRHQSQ 968


>AC024806-3|AAP13749.1|  363|Caenorhabditis elegans Serpentine
           receptor, class w protein40 protein.
          Length = 363

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +2

Query: 275 WKPPSAISVTSFNFTHIRLIPSSCKILIPYFSSMAFTNLVVTL 403
           WKPPS     S NFT I  I     IL+         ++++T+
Sbjct: 195 WKPPSDCPGFSKNFTQIVYIVEKIVILVDVIVFKLLPSIILTI 237


>U97002-4|AAB52267.1|  630|Caenorhabditis elegans Hypothetical
           protein K09H11.4 protein.
          Length = 630

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 40  LSRQHHPPKRHNGSPSGNRHQQFPSQASTLPISGKF 147
           +  + HPP+ H GSP      Q P      P  G+F
Sbjct: 528 VEHEQHPPQSH-GSPHPGPQYQGPPPRKEFPTPGRF 562


>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical
           protein C23F12.1a protein.
          Length = 2329

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 215 TNLVDTLTNTIHRAP*RLP*WKPPSAISVTSF 310
           T + +T+T T HR+P       PP  +S TSF
Sbjct: 357 TQITETITRTTHRSP------SPPRGVSNTSF 382


>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical
           protein C23F12.1b protein.
          Length = 2747

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 215 TNLVDTLTNTIHRAP*RLP*WKPPSAISVTSF 310
           T + +T+T T HR+P       PP  +S TSF
Sbjct: 357 TQITETITRTTHRSP------SPPRGVSNTSF 382


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,749,755
Number of Sequences: 27780
Number of extensions: 183317
Number of successful extensions: 369
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)