Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021925
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   3.0  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   7.0  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   9.2  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   9.2  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -1

Query: 580 LITLVAMMASINAFSSFRSCGVTCHLLTCFFR-NCP 476
           L+TL+     +   SSF S   T  +LTC+   +CP
Sbjct: 46  LVTLLPCFNVLTFISSFFSLFQTARVLTCYCEGHCP 81


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 438 MEYSNNRKNCPTLGQLRKKHV 500
           +  S++RK CP +G    +H+
Sbjct: 224 LSISSSRKQCPAVGDCPDQHI 244



 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 394 YKHRNEWLLNISSAAWNIP 450
           Y+ R EW   +S A +N P
Sbjct: 304 YRFRLEWYRTLSKACYNCP 322


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 356 IPNTPKRDNLPTNTNIETNGC*IYHQRH 439
           IP+T K   L T TN E     + HQ H
Sbjct: 181 IPDTAKSCGLITRTNAERLCSSLLHQAH 208


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 382 FTD*YKHRNEWLLNISSAAWNIPTIEKIV 468
           + D ++    WL  + S AWN    E+++
Sbjct: 282 YPDHFEQIATWLSTLESEAWNQANFERLL 310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,366
Number of Sequences: 2352
Number of extensions: 17217
Number of successful extensions: 44
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)