Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021925
         (697 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016449-2|AAG24006.1|  333|Caenorhabditis elegans Seven tm rece...    31   0.79 
Z81545-6|CAB04441.1|  287|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z75544-4|CAA99880.1|  307|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AC024776-17|ABN43080.1|  365|Caenorhabditis elegans Hypothetical...    30   1.8  
AC024876-11|AAF60895.1|  365|Caenorhabditis elegans Hypothetical...    29   3.2  
Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AL117193-6|CAB54989.1|   46|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF106591-1|AAD47131.2|  710|Caenorhabditis elegans Hypothetical ...    27   9.7  
AF014940-8|AAY43994.1|  356|Caenorhabditis elegans Hypothetical ...    27   9.7  
AC025723-3|AAK29935.1|  254|Caenorhabditis elegans Hypothetical ...    27   9.7  

>AF016449-2|AAG24006.1|  333|Caenorhabditis elegans Seven tm
           receptor protein 244 protein.
          Length = 333

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 569 CGHDGVHKRIFLVSFLWRYMSFTNVLLS*LSKSGTIFSIVGIFH 438
           C   GV   IF++ F++RY++ TN      S+   I+ I+ IF+
Sbjct: 96  CSMFGVSLVIFVIHFIYRYLAITNSNFQKPSRKLAIWFIIPIFY 139


>Z81545-6|CAB04441.1|  287|Caenorhabditis elegans Hypothetical
           protein F49H6.7 protein.
          Length = 287

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -1

Query: 607 FSFKKFIKCLITLVAMMASINAFSSFRSCGVTCHLLTCFFRNCPR 473
           F F  +I  L+  + M+ASI +  +  S GV C+ ++  ++N  R
Sbjct: 226 FWFSNYITMLMAQITMLASILSTLNSASHGVVCYFMSIQYKNTAR 270


>Z75544-4|CAA99880.1|  307|Caenorhabditis elegans Hypothetical
           protein K02A11.3 protein.
          Length = 307

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 522 QERNEENAFMDAIMATSVMRHLMNFLKEKGY 614
           +E+NE   F+D ++ +  M+ L N+ K KG+
Sbjct: 110 EEKNEVGKFLDYVLESRPMQELYNWFKAKGH 140


>AC024776-17|ABN43080.1|  365|Caenorhabditis elegans Hypothetical
           protein Y41D4B.27 protein.
          Length = 365

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 302 KNYNPILNTDFLLHESGGIPNTPKRDNLPTNTNIETNGC 418
           + Y+ +LN    +HE     N+PKRD  P N   ET  C
Sbjct: 113 ETYSLLLNVRICVHEGPNGSNSPKRDPKPVNYK-ETIAC 150


>AC024876-11|AAF60895.1|  365|Caenorhabditis elegans Hypothetical
           protein Y94H6A.2 protein.
          Length = 365

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -3

Query: 389 SVNYLFSVYWGFRR-FREAENRCLK*GCNFYCVHDLKRRAVLTRVRNSWRPVQAELPL 219
           S  Y F+ Y  F+R F+ + NR    GCN + +  L+ +       N  R +QA LP+
Sbjct: 231 SEEYQFTSYSYFKRNFKSSFNRN---GCNAFVLRSLRTQDCKRHEENLQRKLQAALPM 285


>Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical
           protein F49A5.3 protein.
          Length = 228

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = -3

Query: 401 CLY*SVNYLFSVYWGFRRFREAENRCLK*GCNFYCVHDLKRRAVLTRVRNSW 246
           C Y   NY ++ Y      R+A+N C   G N   +H       L  +  S+
Sbjct: 110 CKYNYENYCYTPYNQLETSRDAKNFCASSGSNLTSIHSANENRFLVSILPSY 161


>AL117193-6|CAB54989.1|   46|Caenorhabditis elegans Hypothetical
           protein Y105C5A.10 protein.
          Length = 46

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 190 VPYTITFIPYLASRKKIKHITL*ETSFSLFTSVQHYGKVH 71
           VP+ I  +P  A +K +KH++L E   SL   V+ + K H
Sbjct: 4   VPFLILRLPESALQKSLKHMSLAE-HLSLSFRVEQHSKTH 42


>Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical
           protein K10C3.5b protein.
          Length = 705

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 138 NT*HCKKPHFHCLQVYSTTGK 76
           NT  C+KP F CL++ S TG+
Sbjct: 455 NTTLCEKPDFPCLKIGSQTGE 475


>Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical
           protein K10C3.5a protein.
          Length = 894

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 138 NT*HCKKPHFHCLQVYSTTGK 76
           NT  C+KP F CL++ S TG+
Sbjct: 455 NTTLCEKPDFPCLKIGSQTGE 475


>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical
           protein T28B8.3a protein.
          Length = 1838

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = -3

Query: 248 WRPVQAELPLSGSINNIRLCSIYYHVHSVFGFT*KNKTHNIVRNLI 111
           W  +  E+P+        L  I +   SV+G T ++  HN V   I
Sbjct: 163 WETILQEIPIGNQDQTELLIDICWRFLSVYGMTEEDMKHNAVNTWI 208


>AF106591-1|AAD47131.2|  710|Caenorhabditis elegans Hypothetical
           protein T01A4.3 protein.
          Length = 710

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 529 RSCGVTCHLLTCFFRN 482
           RSCG TCH   C F++
Sbjct: 451 RSCGETCHASICLFKD 466


>AF014940-8|AAY43994.1|  356|Caenorhabditis elegans Hypothetical
           protein W02D7.2 protein.
          Length = 356

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -3

Query: 311 CNFYCVHDLKRRAVLTRVRNSWRPVQAELPLSGSINNIRLCSIYYHVHSVFGFT 150
           C   C      +     + N W  V   +  S  + ++ L  +  +V+SVFGFT
Sbjct: 15  CAVRCAEPNTEKECQCILNNIWLDVYLLIDNSAKMGSVGLLEVASNVNSVFGFT 68


>AC025723-3|AAK29935.1|  254|Caenorhabditis elegans Hypothetical
           protein Y54F10AM.6 protein.
          Length = 254

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = -1

Query: 607 FSF-KKFIKCLITLVAMMASINAFSSFRSCGVTCHLLTCFFRNCPRVGQFFLLLEYSMPL 431
           +SF K++ K L +  + M S+    S + CG+  +  +C F    +  Q  L +E + PL
Sbjct: 65  YSFIKRYEKSLNSFYSYMGSV--LKSKKPCGLCSYKQSCGFGGAVKCNQSPLSVEGTRPL 122

Query: 430 MIYLAAIR 407
           + +  A R
Sbjct: 123 IPFYVAER 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,141,910
Number of Sequences: 27780
Number of extensions: 383377
Number of successful extensions: 969
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)