BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021925 (697 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF016449-2|AAG24006.1| 333|Caenorhabditis elegans Seven tm rece... 31 0.79 Z81545-6|CAB04441.1| 287|Caenorhabditis elegans Hypothetical pr... 31 1.0 Z75544-4|CAA99880.1| 307|Caenorhabditis elegans Hypothetical pr... 30 1.8 AC024776-17|ABN43080.1| 365|Caenorhabditis elegans Hypothetical... 30 1.8 AC024876-11|AAF60895.1| 365|Caenorhabditis elegans Hypothetical... 29 3.2 Z81542-2|CAB04416.1| 228|Caenorhabditis elegans Hypothetical pr... 29 4.2 AL117193-6|CAB54989.1| 46|Caenorhabditis elegans Hypothetical ... 28 5.5 Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 9.7 Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 9.7 Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 27 9.7 AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical ... 27 9.7 AF014940-8|AAY43994.1| 356|Caenorhabditis elegans Hypothetical ... 27 9.7 AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical ... 27 9.7 >AF016449-2|AAG24006.1| 333|Caenorhabditis elegans Seven tm receptor protein 244 protein. Length = 333 Score = 31.1 bits (67), Expect = 0.79 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = -3 Query: 569 CGHDGVHKRIFLVSFLWRYMSFTNVLLS*LSKSGTIFSIVGIFH 438 C GV IF++ F++RY++ TN S+ I+ I+ IF+ Sbjct: 96 CSMFGVSLVIFVIHFIYRYLAITNSNFQKPSRKLAIWFIIPIFY 139 >Z81545-6|CAB04441.1| 287|Caenorhabditis elegans Hypothetical protein F49H6.7 protein. Length = 287 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = -1 Query: 607 FSFKKFIKCLITLVAMMASINAFSSFRSCGVTCHLLTCFFRNCPR 473 F F +I L+ + M+ASI + + S GV C+ ++ ++N R Sbjct: 226 FWFSNYITMLMAQITMLASILSTLNSASHGVVCYFMSIQYKNTAR 270 >Z75544-4|CAA99880.1| 307|Caenorhabditis elegans Hypothetical protein K02A11.3 protein. Length = 307 Score = 29.9 bits (64), Expect = 1.8 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +3 Query: 522 QERNEENAFMDAIMATSVMRHLMNFLKEKGY 614 +E+NE F+D ++ + M+ L N+ K KG+ Sbjct: 110 EEKNEVGKFLDYVLESRPMQELYNWFKAKGH 140 >AC024776-17|ABN43080.1| 365|Caenorhabditis elegans Hypothetical protein Y41D4B.27 protein. Length = 365 Score = 29.9 bits (64), Expect = 1.8 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 Query: 302 KNYNPILNTDFLLHESGGIPNTPKRDNLPTNTNIETNGC 418 + Y+ +LN +HE N+PKRD P N ET C Sbjct: 113 ETYSLLLNVRICVHEGPNGSNSPKRDPKPVNYK-ETIAC 150 >AC024876-11|AAF60895.1| 365|Caenorhabditis elegans Hypothetical protein Y94H6A.2 protein. Length = 365 Score = 29.1 bits (62), Expect = 3.2 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -3 Query: 389 SVNYLFSVYWGFRR-FREAENRCLK*GCNFYCVHDLKRRAVLTRVRNSWRPVQAELPL 219 S Y F+ Y F+R F+ + NR GCN + + L+ + N R +QA LP+ Sbjct: 231 SEEYQFTSYSYFKRNFKSSFNRN---GCNAFVLRSLRTQDCKRHEENLQRKLQAALPM 285 >Z81542-2|CAB04416.1| 228|Caenorhabditis elegans Hypothetical protein F49A5.3 protein. Length = 228 Score = 28.7 bits (61), Expect = 4.2 Identities = 14/52 (26%), Positives = 21/52 (40%) Frame = -3 Query: 401 CLY*SVNYLFSVYWGFRRFREAENRCLK*GCNFYCVHDLKRRAVLTRVRNSW 246 C Y NY ++ Y R+A+N C G N +H L + S+ Sbjct: 110 CKYNYENYCYTPYNQLETSRDAKNFCASSGSNLTSIHSANENRFLVSILPSY 161 >AL117193-6|CAB54989.1| 46|Caenorhabditis elegans Hypothetical protein Y105C5A.10 protein. Length = 46 Score = 28.3 bits (60), Expect = 5.5 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -1 Query: 190 VPYTITFIPYLASRKKIKHITL*ETSFSLFTSVQHYGKVH 71 VP+ I +P A +K +KH++L E SL V+ + K H Sbjct: 4 VPFLILRLPESALQKSLKHMSLAE-HLSLSFRVEQHSKTH 42 >Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical protein K10C3.5b protein. Length = 705 Score = 27.5 bits (58), Expect = 9.7 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -2 Query: 138 NT*HCKKPHFHCLQVYSTTGK 76 NT C+KP F CL++ S TG+ Sbjct: 455 NTTLCEKPDFPCLKIGSQTGE 475 >Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein K10C3.5a protein. Length = 894 Score = 27.5 bits (58), Expect = 9.7 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -2 Query: 138 NT*HCKKPHFHCLQVYSTTGK 76 NT C+KP F CL++ S TG+ Sbjct: 455 NTTLCEKPDFPCLKIGSQTGE 475 >Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical protein T28B8.3a protein. Length = 1838 Score = 27.5 bits (58), Expect = 9.7 Identities = 13/46 (28%), Positives = 20/46 (43%) Frame = -3 Query: 248 WRPVQAELPLSGSINNIRLCSIYYHVHSVFGFT*KNKTHNIVRNLI 111 W + E+P+ L I + SV+G T ++ HN V I Sbjct: 163 WETILQEIPIGNQDQTELLIDICWRFLSVYGMTEEDMKHNAVNTWI 208 >AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical protein T01A4.3 protein. Length = 710 Score = 27.5 bits (58), Expect = 9.7 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -1 Query: 529 RSCGVTCHLLTCFFRN 482 RSCG TCH C F++ Sbjct: 451 RSCGETCHASICLFKD 466 >AF014940-8|AAY43994.1| 356|Caenorhabditis elegans Hypothetical protein W02D7.2 protein. Length = 356 Score = 27.5 bits (58), Expect = 9.7 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = -3 Query: 311 CNFYCVHDLKRRAVLTRVRNSWRPVQAELPLSGSINNIRLCSIYYHVHSVFGFT 150 C C + + N W V + S + ++ L + +V+SVFGFT Sbjct: 15 CAVRCAEPNTEKECQCILNNIWLDVYLLIDNSAKMGSVGLLEVASNVNSVFGFT 68 >AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical protein Y54F10AM.6 protein. Length = 254 Score = 27.5 bits (58), Expect = 9.7 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = -1 Query: 607 FSF-KKFIKCLITLVAMMASINAFSSFRSCGVTCHLLTCFFRNCPRVGQFFLLLEYSMPL 431 +SF K++ K L + + M S+ S + CG+ + +C F + Q L +E + PL Sbjct: 65 YSFIKRYEKSLNSFYSYMGSV--LKSKKPCGLCSYKQSCGFGGAVKCNQSPLSVEGTRPL 122 Query: 430 MIYLAAIR 407 + + A R Sbjct: 123 IPFYVAER 130 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,141,910 Number of Sequences: 27780 Number of extensions: 383377 Number of successful extensions: 969 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 956 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 969 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1602927856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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