Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021924
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   1.9  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   3.4  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    24   4.5  
AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    24   4.5  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 122 ITVSSFFVQFFNVYC 78
           ++ SSFF QFF+ YC
Sbjct: 400 LSCSSFFQQFFHCYC 414


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 702 CEPTSLVVKLRAEWFFGSDSFFSRDQYFLFGEN-LASIFVAIPVTYCAKFVL 550
           C P+ L++ +    F  S+ F   D++   G+N L   FV I +  C  ++L
Sbjct: 607 CAPSVLIMFINMMLFKNSEPFHGCDEFMFEGQNELQRTFVFIAL-LCIPWML 657


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 478 NCIFNHDSCTARNRYKYLNNN 416
           +C + HD C A  ++ Y   N
Sbjct: 113 SCNYGHDRCRATKKFPYAGQN 133


>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 478 NCIFNHDSCTARNRYKYLNNN 416
           +C + HD C A  ++ Y   N
Sbjct: 113 SCNYGHDRCRATKKFPYAGQN 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,339
Number of Sequences: 2352
Number of extensions: 14582
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)