Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021923
(779 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 137 2e-33
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 106 3e-24
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 104 2e-23
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 103 2e-23
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 101 2e-22
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 58 1e-09
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 54 2e-08
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 38 0.002
SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr 1... 28 1.3
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 27 2.3
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 27 3.0
SPAC3G9.15c |fcf2||rRNA processing protein Fcf2 |Schizosaccharom... 27 4.0
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 27 4.0
SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin Nup132|Schizosa... 26 5.3
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 26 5.3
SPBC2D10.03c |||DUF866 domain protein|Schizosaccharomyces pombe|... 26 7.0
SPBC428.17c |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.2
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 25 9.2
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 137 bits (331), Expect = 2e-33
Identities = 62/86 (72%), Positives = 76/86 (88%)
Frame = +2
Query: 254 IDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTF 433
IDLGTT SC+A+MEG+TPKV+ N+EG+RTTPS VAF+K+GERLVG+ AKRQAV N NTF
Sbjct: 55 IDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENTF 114
Query: 434 YATKRLIGRRFDDPEVQKDMKNLSYK 511
+ATKRLIGRRF +PEVQ+D+K + YK
Sbjct: 115 FATKRLIGRRFKEPEVQRDIKEVPYK 140
Score = 130 bits (314), Expect = 2e-31
Identities = 62/90 (68%), Positives = 72/90 (80%)
Frame = +1
Query: 493 EEFVIQVVRASNGDAWVQGTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAY 672
+E ++V SNGDAW++ GK YSPSQIG F+L KM+ETA YL VKNAV+TVPAY
Sbjct: 135 KEVPYKIVEHSNGDAWLEAR-GKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAY 193
Query: 673 FNDSQRQATKDAGQISGLNVLRVINEPTAA 762
FNDSQRQATK AG I+GLNVLRV+NEPTAA
Sbjct: 194 FNDSQRQATKAAGAIAGLNVLRVVNEPTAA 223
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 106 bits (255), Expect = 3e-24
Identities = 49/68 (72%), Positives = 59/68 (86%)
Frame = +1
Query: 559 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLR 738
K ++P +I + VL+KM+ETAEAYL V +AV+TVPAYFNDSQRQATKDAG I+GLNVLR
Sbjct: 110 KTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLR 169
Query: 739 VINEPTAA 762
+INEPTAA
Sbjct: 170 IINEPTAA 177
Score = 97.1 bits (231), Expect = 2e-21
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = +2
Query: 254 IDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTF 433
IDLGTT SCV +++ N +G+RTTPS+VAF+ + ERL+G AK Q N NT
Sbjct: 7 IDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNTI 65
Query: 434 YATKRLIGRRFDDPEVQKDMKNLSYK 511
+ KRLIGR+FDDPEVQ DMK+ +K
Sbjct: 66 FDAKRLIGRKFDDPEVQSDMKHWPFK 91
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 104 bits (249), Expect = 2e-23
Identities = 52/96 (54%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +1
Query: 481 AKGHEEFVIQVVRASNGDAWVQGTDGKV--YSPSQIGAFVLIKMKETAEAYLNTSVKNAV 654
AK + F +V N GK ++P +I A +L KMK+TAEAYL V +AV
Sbjct: 115 AKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAV 174
Query: 655 ITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAA 762
+TVPAYFND+QRQATKDAG I+GLNV+R++NEPTAA
Sbjct: 175 VTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAA 210
Score = 92.7 bits (220), Expect = 5e-20
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +2
Query: 254 IDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTF 433
IDLGTT SCVAVM+ +++ N +G+R TPS+VAF+ E ERLVG AK QA +N NT
Sbjct: 40 IDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFT-EDERLVGEAAKNQAPSNPENTI 98
Query: 434 YATKRLIGRRFDDPEVQKDMKNLSY 508
+ KRLIGR+FD+ + KD+K+ +
Sbjct: 99 FDIKRLIGRKFDEKTMAKDIKSFPF 123
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 103 bits (248), Expect = 2e-23
Identities = 47/68 (69%), Positives = 59/68 (86%)
Frame = +1
Query: 559 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLR 738
K ++P +I + VL+KM+E+AEA+L V +AV+TVPAYFNDSQRQATKDAG I+GLNVLR
Sbjct: 110 KTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLR 169
Query: 739 VINEPTAA 762
+INEPTAA
Sbjct: 170 IINEPTAA 177
Score = 96.3 bits (229), Expect = 4e-21
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = +2
Query: 254 IDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTF 433
IDLGTT SCV +++ N +G+RTTPS+VAF+ + ERL+G AK Q N NT
Sbjct: 7 IDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNTI 65
Query: 434 YATKRLIGRRFDDPEVQKDMKNLSYK 511
+ KRLIGRRF+DPEVQ DMK+ +K
Sbjct: 66 FDAKRLIGRRFNDPEVQSDMKHWPFK 91
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 101 bits (241), Expect = 2e-22
Identities = 50/86 (58%), Positives = 62/86 (72%)
Frame = +2
Query: 254 IDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTF 433
IDLGTT SCVAV E +++ N +G+RTTPS VAF+ E ERLVG AK QA N NT
Sbjct: 11 IDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFT-ETERLVGDAAKNQAAMNPRNTV 69
Query: 434 YATKRLIGRRFDDPEVQKDMKNLSYK 511
+ KRLIGRR++DPE QKD+K+ +K
Sbjct: 70 FDAKRLIGRRYEDPETQKDIKHWPFK 95
Score = 96.3 bits (229), Expect = 4e-21
Identities = 47/68 (69%), Positives = 55/68 (80%)
Frame = +1
Query: 559 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLR 738
K ++ +I A VL KMKE +EA LN V+ AVITVPAYF+DSQR ATKDAG I+GLNVLR
Sbjct: 114 KQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLR 173
Query: 739 VINEPTAA 762
+INEPTAA
Sbjct: 174 IINEPTAA 181
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 58.4 bits (135), Expect = 1e-09
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +2
Query: 254 IDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTF 433
ID G + + +AV + V+ N +R+TPS V++ E R +G AK +N NT
Sbjct: 10 IDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYG-ERSRFLGEAAKSAEASNFRNTV 68
Query: 434 YATKRLIGRRFDDPEVQKDMKN 499
+ KRL GR +DDPE+ KD+++
Sbjct: 69 GSLKRLAGRTYDDPEI-KDIES 89
Score = 56.8 bits (131), Expect = 3e-09
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +1
Query: 565 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVI 744
+S Q+ A K+K AEA L SV + VI++PA+F D QR+A +A I+GLN LR++
Sbjct: 116 FSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLM 175
Query: 745 NEPTAA 762
N+ AA
Sbjct: 176 NDNAAA 181
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 54.0 bits (124), Expect = 2e-08
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +1
Query: 559 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLR 738
K+ + + L ++ E+AE +L T V V++VP YF D+QR+A + A +GL VL+
Sbjct: 136 KILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQ 195
Query: 739 VINEPTA 759
+I++P A
Sbjct: 196 LIHDPAA 202
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +1
Query: 550 TDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLN 729
+D + YS +I A + AE + + + V+TVP +FN+ QR +A +I +
Sbjct: 130 SDEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKH 189
Query: 730 VLRVINEPTA 759
VL +I++ A
Sbjct: 190 VLALIDDNVA 199
>SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 484
Score = 28.3 bits (60), Expect = 1.3
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Frame = +1
Query: 433 LRDEEIDRTSIRRS------RSAKGHEEFVIQVVRASNGDAWVQGTDGKVYSPSQIGAFV 594
L+ E +R IRR+ RSA+ V +VR N + + GTDG VY+ +
Sbjct: 371 LKTTEEERQFIRRACELIGTRSARLSACGVCALVRKMNKPSMIVGTDGSVYN---LYPRF 427
Query: 595 LIKMKETAEAYLNTSVKNAVITVPA 669
++ + + L + + V+T+PA
Sbjct: 428 KDRLAQAFKDILGEEIGSKVVTIPA 452
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 451 DRTSIRRSRSAKGHEEFVIQVVRASNGDAWVQGTDGKVYSPS 576
DR+S+RRS+S K ++ R A + G + SPS
Sbjct: 233 DRSSVRRSQSFKNRRNGKPRISRLHTSHASIDGLTDFIQSPS 274
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 27.1 bits (57), Expect = 3.0
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 10/64 (15%)
Frame = -3
Query: 645 FHTCVQVCFSSFLHLY*HKCTNLARRVYFAISTL----HPGVAI------RSPDYLYDKF 496
F+ V F SF Y KCT A V +AIS L + GV + RSPD +++
Sbjct: 387 FYGLDDVIFHSFTRTYGFKCTLSASDVSYAISALLEMGNTGVLLQSKTVARSPDMTEEEY 446
Query: 495 FMSF 484
F
Sbjct: 447 LEKF 450
>SPAC3G9.15c |fcf2||rRNA processing protein Fcf2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 114 GLSSDLYTQRNFSSILKSNATPTVPIYQRH 203
GL D + + S I ++ PTVPIY+ H
Sbjct: 65 GLKKDELVENSESYINDASFEPTVPIYESH 94
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 477 SGSSNRRPINLFVA*NVLPLFVTACRLAGIPTRRSP 370
SG+ NRRPI+ V N+ P +T R A P SP
Sbjct: 523 SGNQNRRPISFPVISNMQP-NITNVRSASAPLCSSP 557
>SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin
Nup132|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1162
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -1
Query: 605 IFINTNAPIWLGEYTLPSVPCTQASPFEALTTCMTNS 495
IF++T LG+Y++P+ C A+P+ + +S
Sbjct: 411 IFMSTCYKYVLGKYSIPTESCFIATPYSGIAEIEVHS 447
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 268 RAQIDPMTAPRTPSDLFLNCTPCRW*IGTV 179
R P+ PRT D+ +PC+ +GT+
Sbjct: 571 RRSASPLQHPRTSPDMLDKTSPCKRGLGTI 600
>SPBC2D10.03c |||DUF866 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = -2
Query: 307 GCLALHDGNARVCRAQIDPMTAPRTPSDLFLNCTPCR 197
GC +HD + R++ + + ++L C CR
Sbjct: 36 GCREIHDNAIEISRSETHSIPGSKGEANLIWTCKNCR 72
>SPBC428.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 602
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 723 TRDLTCIFCGLTLGIIEVSWHCYDCIFHTCVQVCFSS 613
TR+L + GL LG++E S I H V+V F +
Sbjct: 471 TRELIILILGLLLGLVEESHEFIQTITH--VEVSFGA 505
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 198 AGK*ELWVLRCFSKLTKNFSAYTGLNLIRCTLKPFGRMARVAFNI 64
+GK ++L CF K+T+ + TGL + + P +A FN+
Sbjct: 49 SGKTLAYLLPCFDKVTRRDTDETGLGAL--IVAPTRELATQIFNV 91
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,353,020
Number of Sequences: 5004
Number of extensions: 73066
Number of successful extensions: 202
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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