Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021923
(779 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 104 9e-23
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 104 9e-23
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 3e-22
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 101 7e-22
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 78 7e-15
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 71 1e-12
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 58 1e-08
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 30 2.4
SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1) 29 4.2
SB_8905| Best HMM Match : FYVE (HMM E-Value=0.13) 29 4.2
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_4326| Best HMM Match : V-set (HMM E-Value=0.036) 29 4.2
SB_46086| Best HMM Match : RVT_1 (HMM E-Value=1.6e-20) 29 5.6
SB_42496| Best HMM Match : rve (HMM E-Value=0.02) 28 7.4
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_42589| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_16839| Best HMM Match : zf-GRF (HMM E-Value=3.7e-15) 28 9.8
SB_6911| Best HMM Match : Ank (HMM E-Value=0) 28 9.8
SB_29300| Best HMM Match : GFO_IDH_MocA (HMM E-Value=2.1e-17) 28 9.8
SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004) 28 9.8
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 104 bits (249), Expect = 9e-23
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = +1
Query: 559 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLR 738
K + P +I + VL KMKETAEAYL V +AV+TVPAYF+DSQRQATKDAG I+GLNVLR
Sbjct: 112 KSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLR 171
Query: 739 VINEPTAA 762
+INEPTAA
Sbjct: 172 IINEPTAA 179
Score = 91.1 bits (216), Expect = 9e-19
Identities = 44/80 (55%), Positives = 56/80 (70%)
Frame = +2
Query: 254 IDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTF 433
IDLGTT SCV V + +++ N +G+RTTPS+VAFS + ERL+G AK Q N NT
Sbjct: 9 IDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFS-DTERLIGDAAKNQVAMNPENTV 67
Query: 434 YATKRLIGRRFDDPEVQKDM 493
+ KRLIGR+FDDP V +DM
Sbjct: 68 FDAKRLIGRKFDDPVVARDM 87
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 104 bits (249), Expect = 9e-23
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +1
Query: 559 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLR 738
K ++ +I + VL KMKETAEAYL V +AVITVPAYFNDSQRQATKDAG I+GLNVLR
Sbjct: 112 KTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLR 171
Query: 739 VINEPTAA 762
VINEPTAA
Sbjct: 172 VINEPTAA 179
Score = 91.5 bits (217), Expect = 7e-19
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +2
Query: 254 IDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTF 433
IDLGTT SCV V + +++ N +G+RTTPS+V F+ + ERLVG AK Q N NT
Sbjct: 9 IDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFT-DTERLVGDAAKNQVALNPENTI 67
Query: 434 YATKRLIGRRFDDPEVQKDMKNLSYK 511
+ KRLIGRR+DD VQ DMK +K
Sbjct: 68 FDAKRLIGRRYDDATVQSDMKLWPFK 93
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 102 bits (245), Expect = 3e-22
Identities = 50/62 (80%), Positives = 54/62 (87%)
Frame = +1
Query: 577 QIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPT 756
QI + VL KMKETAEAYL V +AV+TVPAYFNDSQRQATKDAG ISGLNVLR+INEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 757 AA 762
AA
Sbjct: 271 AA 272
Score = 97.9 bits (233), Expect = 8e-21
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = +2
Query: 254 IDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTF 433
IDLGTT SCV V + +++ N +G+RTTPS+VAF+ E ERLVG AK Q N NT
Sbjct: 9 IDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDE-ERLVGDAAKNQVAMNPTNTI 67
Query: 434 YATKRLIGRRFDDPEVQKDMKNLSYK 511
+ KRLIGRRFDDP V+ DMK+ S++
Sbjct: 68 FDAKRLIGRRFDDPGVKDDMKHWSFE 93
Score = 74.9 bits (176), Expect = 6e-14
Identities = 35/52 (67%), Positives = 41/52 (78%)
Frame = +1
Query: 559 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQ 714
K + +I + VL KMKETAEAYL V +AV+TVPAYFNDSQRQATKDAG+
Sbjct: 137 KTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGE 188
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 101 bits (242), Expect = 7e-22
Identities = 47/68 (69%), Positives = 56/68 (82%)
Frame = +1
Query: 559 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLR 738
K ++ +I A VL KMKETAEAYL V +AV+TVPAYFND+QRQATKDAG I+GL V+R
Sbjct: 810 KTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMR 869
Query: 739 VINEPTAA 762
+INEPTAA
Sbjct: 870 IINEPTAA 877
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/86 (52%), Positives = 59/86 (68%)
Frame = +2
Query: 254 IDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTF 433
IDLGTT SCV V + +++ N +G+R TPS+VAF++EGERL+G AK Q TN NT
Sbjct: 706 IDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPENTV 765
Query: 434 YATKRLIGRRFDDPEVQKDMKNLSYK 511
+ KRLIGR +DD VQ D+K +K
Sbjct: 766 FDAKRLIGRSWDDTSVQNDLKFFPFK 791
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 78.2 bits (184), Expect = 7e-15
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = +1
Query: 565 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVL 735
++P QI A VL ++K AEA+L +VK AVITVPA+FND+QRQATKDAG I+GL+VL
Sbjct: 13 FAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVL 69
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +1
Query: 562 VYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRV 741
V +P +IG +V+ K++ AE L T+V AV++VPA F+ QR AT A ++G+ VLRV
Sbjct: 143 VITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRV 202
Query: 742 INEPTAA 762
INEPTAA
Sbjct: 203 INEPTAA 209
Score = 51.6 bits (118), Expect = 7e-07
Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 254 IDLGTTNSCVAVMEGKTPKV--VENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 427
IDLGTT SCV + + ++ + + PS VAF+ +G LVG A QA N N
Sbjct: 36 IDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGV-LVGEKALSQAEINPKN 94
Query: 428 TFYATKRLIGRRFDDPEV 481
T Y KR IG+ F E+
Sbjct: 95 TIYDAKRFIGKTFTKQEL 112
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = +1
Query: 559 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLR 738
+V+SP Q+ A + ++K TAE L T V + VI+VP+Y+ D QR+ DA +GLN LR
Sbjct: 169 EVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLR 228
Query: 739 VINEPTA 759
++N+ TA
Sbjct: 229 LMNDTTA 235
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 410 VTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYK 511
++N NT KR IGR+F DP VQK++ +L YK
Sbjct: 116 ISNLKNTISQFKRFIGRKFSDPAVQKEIPHLPYK 149
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 257 DLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQ 406
D+G + +AV G + V N R TPS V+ + +RL+G K Q
Sbjct: 7 DVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLG-DKQRLIGTSGKNQ 55
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +2
Query: 290 MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 424
M+GKTPKV+EN+EGSRTTPS VAF+ EGERL + V SG
Sbjct: 1 MDGKTPKVIENAEGSRTTPSVVAFTPEGERLTDINLPYITVDASG 45
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/65 (32%), Positives = 41/65 (63%)
Frame = +1
Query: 565 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVI 744
++P ++ +L + E + + +K+ V+TVP +FN ++R+A A ++ GLNVL+++
Sbjct: 80 FTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIM 139
Query: 745 NEPTA 759
N TA
Sbjct: 140 NSNTA 144
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +2
Query: 263 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLV---GMPAKRQAVTNSGNTF 433
GT + V++G T ++ N G R TP+ VAFS + E+L+ G+P + +N N
Sbjct: 72 GTFRTRWPVLDGNTT-IIANDAGDRVTPAMVAFS-DTEKLIDKDGLP-YYEVESNERNIQ 128
Query: 434 YATKRLI 454
+ K +I
Sbjct: 129 VSPKEVI 135
>SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1)
Length = 352
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 387 PTRRSPSFEKATWEGVVREPSLFSTTLGVLPSMTATH 277
PT +PS E W V P+L++ T G L T T+
Sbjct: 164 PTYGTPSMEPHVWNPNVWNPNLWNLTYGTLSIETPTY 200
>SB_8905| Best HMM Match : FYVE (HMM E-Value=0.13)
Length = 687
Score = 29.1 bits (62), Expect = 4.2
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Frame = +3
Query: 105 ECTGLSSDLYTQRNFSSILKSNATPTVPIYQRHGVQFRNKSEGVRGAVIGSIWARQTRAL 284
E T +S + T FSS K+ T+P +G+QF+ ++ GS+ R T L
Sbjct: 115 EVTTSNSCVSTSSEFSSSEKT----TLPDRHTNGIQFKKMTQSEPSRDHGSLETRSTNDL 170
Query: 285 PSWRA-RHPRWWKTVKALGRLPPMWPSRKRASVWSECPPNGKRSRIAVTRFTRRRD*SD- 458
S + + K+VK R + S K +S+++E P N ++ + F R + +
Sbjct: 171 SSKESYKCYICCKSVKQNSRQGKLRRS-KFSSLFTELPDNVGHFKVCSSCFDRLSEQREQ 229
Query: 459 -VDSTIPKCKR 488
+ + IP+ +R
Sbjct: 230 FIQANIPENER 240
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -1
Query: 365 SRRPHGRESSESLHCFPPPWVSCPP*RQRTSLSCPDRSNDGSTNTLRLVSKLYAMSL 195
S R HG S+ +LH P PP Q S S R + + NT S L M L
Sbjct: 669 SSRRHGNNSNTTLHTLAPTTHKPPPSNQHNS-SSSHRISSTTPNTACTTSNLPRMPL 724
>SB_4326| Best HMM Match : V-set (HMM E-Value=0.036)
Length = 156
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = -3
Query: 372 PSFEKATWEGVVREPSLFSTT---LGVLPSMTATHEFVVPR 259
P+ K TW+ VRE +TT G PS A H F P+
Sbjct: 95 PAITKKTWQLSVRETGAVNTTYFPAGERPSKIADHSFSSPK 135
>SB_46086| Best HMM Match : RVT_1 (HMM E-Value=1.6e-20)
Length = 723
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 213 FRNKSEGVRGAVIGSIWARQTRALPSWRARHPRWWKTVKAL 335
+RNK + + + G+ + R+ AL + RWWK VKAL
Sbjct: 274 WRNKVQRLIKSCKGTFYERKVEALKE--SNISRWWKEVKAL 312
>SB_42496| Best HMM Match : rve (HMM E-Value=0.02)
Length = 371
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 312 WWKTVKALGRLPPMWPSRKR 371
WWK K L P WPS+ R
Sbjct: 75 WWKGPKLLSASPASWPSQTR 94
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/93 (25%), Positives = 36/93 (38%)
Frame = +2
Query: 302 TPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTFYATKRLIGRRFDDPEV 481
TPK E E + +H + ++ P + T T + +F EV
Sbjct: 306 TPKAPEGDESQTLSDTHAVADAKTKQADAQPTSTETATKPVET------PVENKFYPTEV 359
Query: 482 QKDMKNLSYK*SGLRMATPGCKVLMAKYTLRAR 580
KD+ + S S L PG K AKYT+ +
Sbjct: 360 -KDLDDPSSLMSKLIAPAPGDKPQKAKYTIHVK 391
>SB_42589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -1
Query: 398 WRAFRPDARPLSRR---PHGRESSESLHCFPPPWVSCPP 291
W A PD S R P G+ SE+L PP SC P
Sbjct: 27 WTAPDPDIPVYSARARSPRGQRQSENLRTIPPVSNSCSP 65
>SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 78 RGPFGRKALECTGLSSDLYTQRNFSSILKSNATPTVPIYQR 200
R GR EC+G+ LYT+ F + A TVP QR
Sbjct: 384 RQRLGRAGRECSGVCYRLYTEEQFEQL----AEATVPEIQR 420
>SB_16839| Best HMM Match : zf-GRF (HMM E-Value=3.7e-15)
Length = 333
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 278 CVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTFYA 439
CV +TP +V + G TTP + +RL M + N G FYA
Sbjct: 219 CVTPGASRTPTLVPSINGGNTTPPLCDCGRRAKRLTVM----KPGPNQGRVFYA 268
>SB_6911| Best HMM Match : Ank (HMM E-Value=0)
Length = 1961
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 502 VIQVVRASNGDAWVQGTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAY 672
VIQ+V A N D W DGK SP + + IK + + + + N I + ++
Sbjct: 1518 VIQLVNAHNADLWSCTEDGK--SPLLLSVWYAIKYRPYLNLHEPSLITNLEIKLASH 1572
>SB_29300| Best HMM Match : GFO_IDH_MocA (HMM E-Value=2.1e-17)
Length = 634
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 300 RHPRWWKTVKALGRLPPMWPSRKRAS 377
+ P +++ ALG +PP+WP+ RAS
Sbjct: 557 KSPAAIQSLIALGAVPPVWPNGHRAS 582
>SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004)
Length = 969
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -2
Query: 439 RVKRVTAIRDRLPFGGHSDQTLALFREGHMGGSRPRAFTV----FHHLGCLALHDGNA 278
RV RV R R P +D + GHMG RP F++ + L LAL G A
Sbjct: 209 RVSRVMRKRPRAPVVEAADLVEYVQALGHMGHLRPHGFSLPFYQLYMLDVLALRKGAA 266
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,777,419
Number of Sequences: 59808
Number of extensions: 575052
Number of successful extensions: 1727
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1722
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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