Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021923
         (779 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   3.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.6  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   5.6  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 278 TSLSCPDRSNDGSTNTLRLVSKLYAMSLVNR 186
           T + C D S D STNT+ ++S  +   L ++
Sbjct: 344 TMVFCNDLSIDRSTNTMYVLSDNFQQLLFSK 374


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 211 NLETSLRVFVEPSLDRSGHD 270
           N++  +R+F+ P  D  GH+
Sbjct: 509 NVKGMVRIFLGPKYDEFGHE 528


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 211 NLETSLRVFVEPSLDRSGHD 270
           N++  +R+F+ P  D  GH+
Sbjct: 509 NVKGMVRIFLGPKYDEFGHE 528


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 211 NLETSLRVFVEPSLDRSGHD 270
           N++  +R+F+ P  D  GH+
Sbjct: 135 NVKGMVRIFLGPKYDEFGHE 154


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,094
Number of Sequences: 438
Number of extensions: 4982
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)