Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021922
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.79 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   3.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   5.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.5  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   5.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   7.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = -2

Query: 296 HFFVQFYLLSV*AFQSLF*INYFCGIYFFQYLGFYFISYPF*NFMNLMFVCRKHFT 129
           +F+  F + +V     L   ++FC    F     +  ++ F N   L  +C  +FT
Sbjct: 148 YFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFT 203


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 596 ISVMYLFVSVLSVSDRKTSFI 534
           +S MY F+  LS++D  T+F+
Sbjct: 72  LSRMYFFILHLSIADLITAFL 92


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 284 GQKNEMLKIDVENNEVPPP 340
           G K  +  + +ENN  PPP
Sbjct: 716 GAKESISYLSMENNAPPPP 734


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 317 ENNEVPPPIVYEKQEVN 367
           ENN+  PPI Y   + N
Sbjct: 37  ENNQALPPITYPPSDWN 53


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 518 ACIEYPHLERIQE 480
           +C+EY HL R +E
Sbjct: 155 SCMEYQHLHRYKE 167


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 317 ENNEVPPPIVYEKQEVN 367
           ENN+  PPI Y   + N
Sbjct: 28  ENNQALPPITYPPSDWN 44


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 518 ACIEYPHLERIQE 480
           +C+EY HL R +E
Sbjct: 155 SCMEYQHLHRYKE 167


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 518 ACIEYPHLERIQE 480
           +C+EY HL R +E
Sbjct: 155 SCMEYQHLHRYKE 167


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = -2

Query: 350 HTQ*EEGLHYFQHQFSASH-FFVQFYLLSV*AFQSLF*INYF--CGIYFFQYLGFYFISY 180
           H    E  HY    F AS+ FF  +       F ++  + ++    I +FQ    +F+++
Sbjct: 106 HNNIREKSHYCL--FVASNCFFWSYQSYMSYIFANIMGLEFYKQFAIEYFQMYVLFFVNF 163

Query: 179 PF*NFMNLMFVCRKHFTK 126
            F   + ++ V  ++ TK
Sbjct: 164 AFFVVVKMLLVRYRNLTK 181


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = -2

Query: 350 HTQ*EEGLHYFQHQFSASH-FFVQFYLLSV*AFQSLF*INYF--CGIYFFQYLGFYFISY 180
           H    E  HY    F AS+ FF  +       F ++  + ++    I +FQ    +F+++
Sbjct: 106 HNNIREKSHYCL--FVASNCFFWSYQSYMSYIFANIMGLEFYKQFAIEYFQMYVLFFVNF 163

Query: 179 PF*NFMNLMFVCRKHFTK 126
            F   + ++ V  ++ TK
Sbjct: 164 AFFVVVKMLLVRYRNLTK 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,785
Number of Sequences: 336
Number of extensions: 3409
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)