SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021922
         (699 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061108-1|AAL28656.1|  708|Drosophila melanogaster LD09551p pro...    38   0.017
AE014296-285|AAN11490.1|  708|Drosophila melanogaster CG12099-PB...    38   0.017
AE014296-284|AAF47511.1|  708|Drosophila melanogaster CG12099-PA...    38   0.017
X74030-1|CAA52189.1|  729|Drosophila melanogaster DFR1 protein p...    34   0.21 
D14977-1|BAA03617.1|  730|Drosophila melanogaster fibroblast gro...    34   0.21 
D14976-1|BAA03616.1|  730|Drosophila melanogaster fibroblast gro...    34   0.21 
AY051812-1|AAK93236.1|  729|Drosophila melanogaster LD32130p pro...    34   0.21 
AE014297-2435|AAN13755.1|  729|Drosophila melanogaster CG7223-PC...    34   0.21 
AE014297-2434|AAF55490.1|  729|Drosophila melanogaster CG7223-PB...    34   0.21 
AE014297-2433|AAF55489.1|  729|Drosophila melanogaster CG7223-PA...    34   0.21 

>AY061108-1|AAL28656.1|  708|Drosophila melanogaster LD09551p
           protein.
          Length = 708

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +3

Query: 615 KYFYFYQAEDGQQVFWNSLNVRIL 686
           KY+YFYQ+ DGQ ++ + LNV++L
Sbjct: 422 KYYYFYQSNDGQNIYLHPLNVKML 445


>AE014296-285|AAN11490.1|  708|Drosophila melanogaster CG12099-PB,
           isoform B protein.
          Length = 708

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +3

Query: 615 KYFYFYQAEDGQQVFWNSLNVRIL 686
           KY+YFYQ+ DGQ ++ + LNV++L
Sbjct: 422 KYYYFYQSNDGQNIYLHPLNVKML 445


>AE014296-284|AAF47511.1|  708|Drosophila melanogaster CG12099-PA,
           isoform A protein.
          Length = 708

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +3

Query: 615 KYFYFYQAEDGQQVFWNSLNVRIL 686
           KY+YFYQ+ DGQ ++ + LNV++L
Sbjct: 422 KYYYFYQSNDGQNIYLHPLNVKML 445


>X74030-1|CAA52189.1|  729|Drosophila melanogaster DFR1 protein
           protein.
          Length = 729

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +2

Query: 221 YHRNSLSRTGFEMLKQKEDKIGQ-KNEMLKIDVENNEVPPPIVYEKQEVNENKLDWFN 391
           +H N+  R  F  + +  DK+ Q K + L +D+ N + PP    E+++  +N   W N
Sbjct: 671 WHFNADDRPPFTEIVEYMDKLLQTKEDYLDVDIANLDTPPSTSDEEEDETDNLQKWCN 728


>D14977-1|BAA03617.1|  730|Drosophila melanogaster fibroblast growth
           factor receptor protein.
          Length = 730

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +2

Query: 221 YHRNSLSRTGFEMLKQKEDKIGQ-KNEMLKIDVENNEVPPPIVYEKQEVNENKLDWFN 391
           +H N+  R  F  + +  DK+ Q K + L +D+ N + PP    E+++  +N   W N
Sbjct: 672 WHFNADDRPPFTEIVEYMDKLLQTKEDYLDVDIANLDTPPSTSDEEEDETDNLQKWCN 729


>D14976-1|BAA03616.1|  730|Drosophila melanogaster fibroblast growth
           factor receptor protein.
          Length = 730

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +2

Query: 221 YHRNSLSRTGFEMLKQKEDKIGQ-KNEMLKIDVENNEVPPPIVYEKQEVNENKLDWFN 391
           +H N+  R  F  + +  DK+ Q K + L +D+ N + PP    E+++  +N   W N
Sbjct: 672 WHFNADDRPPFTEIVEYMDKLLQTKEDYLDVDIANLDTPPSTSDEEEDETDNLQKWCN 729


>AY051812-1|AAK93236.1|  729|Drosophila melanogaster LD32130p
           protein.
          Length = 729

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +2

Query: 221 YHRNSLSRTGFEMLKQKEDKIGQ-KNEMLKIDVENNEVPPPIVYEKQEVNENKLDWFN 391
           +H N+  R  F  + +  DK+ Q K + L +D+ N + PP    E+++  +N   W N
Sbjct: 671 WHFNADDRPPFTEIVEYMDKLLQTKEDYLDVDIANLDTPPSTSDEEEDETDNLQKWCN 728


>AE014297-2435|AAN13755.1|  729|Drosophila melanogaster CG7223-PC,
           isoform C protein.
          Length = 729

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +2

Query: 221 YHRNSLSRTGFEMLKQKEDKIGQ-KNEMLKIDVENNEVPPPIVYEKQEVNENKLDWFN 391
           +H N+  R  F  + +  DK+ Q K + L +D+ N + PP    E+++  +N   W N
Sbjct: 671 WHFNADDRPPFTEIVEYMDKLLQTKEDYLDVDIANLDTPPSTSDEEEDETDNLQKWCN 728


>AE014297-2434|AAF55490.1|  729|Drosophila melanogaster CG7223-PB,
           isoform B protein.
          Length = 729

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +2

Query: 221 YHRNSLSRTGFEMLKQKEDKIGQ-KNEMLKIDVENNEVPPPIVYEKQEVNENKLDWFN 391
           +H N+  R  F  + +  DK+ Q K + L +D+ N + PP    E+++  +N   W N
Sbjct: 671 WHFNADDRPPFTEIVEYMDKLLQTKEDYLDVDIANLDTPPSTSDEEEDETDNLQKWCN 728


>AE014297-2433|AAF55489.1|  729|Drosophila melanogaster CG7223-PA,
           isoform A protein.
          Length = 729

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +2

Query: 221 YHRNSLSRTGFEMLKQKEDKIGQ-KNEMLKIDVENNEVPPPIVYEKQEVNENKLDWFN 391
           +H N+  R  F  + +  DK+ Q K + L +D+ N + PP    E+++  +N   W N
Sbjct: 671 WHFNADDRPPFTEIVEYMDKLLQTKEDYLDVDIANLDTPPSTSDEEEDETDNLQKWCN 728


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,164,673
Number of Sequences: 53049
Number of extensions: 537729
Number of successful extensions: 1700
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1700
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -