Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021920
         (781 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850...    33   0.34 
05_05_0276 + 23771233-23771268,23773552-23773897,23774425-237745...    29   4.1  
12_02_0410 + 18701258-18701327,18701398-18701630,18701782-187026...    28   9.6  
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57...    28   9.6  

>08_01_0871 +
           8502396-8502417,8503606-8503732,8503891-8503990,
           8504725-8504793,8504870-8505043,8505196-8505373,
           8505462-8505594,8505702-8505864,8507031-8507181,
           8507266-8507366,8507633-8507788,8508105-8508173,
           8508256-8508324,8508403-8508540,8508639-8508767,
           8509013-8509053,8510019-8510106,8510199-8510339,
           8510428-8510553,8510671-8510736,8510994-8511291,
           8511387-8511595,8511689-8511802
          Length = 953

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = +2

Query: 263 KKMYPHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMT 442
           KK+YP S + D S  PSK    + +  S    P + K  S L E+ K  E     + TMT
Sbjct: 811 KKLYPKSATPDSSSAPSKSSATASLTGS-FDRPKSVKDGSEL-EKPKQEEDAKEGINTMT 868

Query: 443 NSPKS 457
           +  +S
Sbjct: 869 SRVES 873


>05_05_0276 +
           23771233-23771268,23773552-23773897,23774425-23774541,
           23774712-23774810,23774949-23775016,23775107-23775181,
           23775386-23775931,23776040-23776092,23776163-23776204,
           23776314-23776458,23776541-23776651,23777496-23777921,
           23778116-23778373
          Length = 773

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = +2

Query: 359 PINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQET 496
           P+N +P   +I++   P+ + S     ++ P+S ++  +PK+SQ T
Sbjct: 267 PLNPRPREQVIQQNHEPQAQKSVRLQSSSGPESHKVQ-SPKSSQRT 311


>12_02_0410 +
           18701258-18701327,18701398-18701630,18701782-18702639,
           18703006-18703865,18704285-18704395,18704486-18704567,
           18704643-18704735,18704795-18704989
          Length = 833

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 430 KNHDKLTKIPEINSHSENFTRNTCKLIWYVAMLIG 534
           + HD+LT+  E   HS      +C+  W VA + G
Sbjct: 359 QQHDELTEALETAEHSGRVRGQSCRTDWMVARVNG 393


>07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-571542,
            571635-571885,572018-572128,572209-572320,572626-572716,
            573168-573507,573678-573900,573946-574204,574274-574481,
            574572-574622,574712-574870,574956-575120,575322-575399,
            575732-576031,576107-576259,576871-576918,577019-577188,
            577738-577852,578462-578623,578789-578893,578969-579199,
            579277-579410,579484-579738,579822-580110,580214-580306,
            580395-580520,580646-580897
          Length = 1693

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 465  NLWDFGEFVMVFRGEFLVSGDFNLSIRG 382
            N  DF + + + + E+L+  DF+L +RG
Sbjct: 1170 NQLDFPKIISLLKKEYLLKDDFSLKVRG 1197


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,343,535
Number of Sequences: 37544
Number of extensions: 388055
Number of successful extensions: 940
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)