Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021920
(781 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_26471| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 31 1.0
SB_8676| Best HMM Match : Peptidase_M18 (HMM E-Value=0) 31 1.4
SB_47342| Best HMM Match : VWA (HMM E-Value=0) 30 2.4
SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_6095| Best HMM Match : 7tm_1 (HMM E-Value=0.013) 30 2.4
SB_41658| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_5058| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_54687| Best HMM Match : Trp_Tyr_perm (HMM E-Value=2.2) 29 5.6
SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14) 29 5.6
SB_441| Best HMM Match : zf-C2H2 (HMM E-Value=5.5) 29 5.6
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_41024| Best HMM Match : DIL (HMM E-Value=1.3e-30) 29 5.6
SB_56393| Best HMM Match : CTF_NFI (HMM E-Value=0.75) 28 7.4
SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_50158| Best HMM Match : Toxin_16 (HMM E-Value=2) 28 9.8
SB_22476| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 28 9.8
SB_16273| Best HMM Match : SWIM (HMM E-Value=0.02) 28 9.8
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_56694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_54211| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_44656| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 9.8
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 33.1 bits (72), Expect = 0.26
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 302 PGPSKRRILSDIQ-NSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTP 478
P S R ++D+ N++ S P+ YK P+ KSP P+ ++ +PKS TP
Sbjct: 369 PIVSHRMRITDVAFNAVSSKPV-YKAFRPV----KSPGREQKPVISLMPTPKSVTTGTTP 423
Query: 479 KTSQETLV 502
T+ E LV
Sbjct: 424 ATTSEQLV 431
>SB_26471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 31.9 bits (69), Expect = 0.60
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -2
Query: 468 VNLWDFGEFVMVFRGEFL--VSGDFNLSIRGEVGL*LIGELSIEFC--MSERILRFEGPG 301
++ W +GE F GEF G+ + S+ GE+ L GELS F +S
Sbjct: 76 ISSWFYGELSFWFYGEFSSWFYGELSSSLSGELSSWLYGELSSWFYGELSSWFYGELSSW 135
Query: 300 LWSKLSEWGY 271
L+ +LS W Y
Sbjct: 136 LYGELSSWFY 145
>SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 296 QSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSP--ETRNSPLKTMTNSPKSQR 463
Q+ P ++ + I N ++PIN + +P+I++ +P E N+PL N+P Q+
Sbjct: 12 QANNPINQQASNPI-NQQANNPINQQANNPMIQQANNPLTEQANNPLTQEANNPTGQQ 68
>SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +2
Query: 308 PSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRL 466
PS I+ D S SSP N + SP++ RL E+R+S L+ ++ SP RL
Sbjct: 50 PSDDCIIFDDSFSSCSSPENKQLYSPVVARLLD-ESRSSELEELSYSPVVARL 101
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -2
Query: 297 WSKLSE-WGYIFFL*CARMLLPVY-VLLRCYRNLS*SFLLLIRNTGNYFRNFHYSLPTFW 124
W +SE IFF CA ++ Y VLLR Y+ + S L+ N YF YS+
Sbjct: 343 WQSVSERLDVIFFFICAITMIVTYSVLLRGYKYMELSLDKLVYNLVYYFGATKYSVTEIM 402
Query: 123 HNVLILI 103
VL I
Sbjct: 403 KIVLCSI 409
>SB_8676| Best HMM Match : Peptidase_M18 (HMM E-Value=0)
Length = 1161
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 382 TSDRKIKVTRDQKLTSKNHDKLTKIPEINSHSENFTRNTC----KLIWYV 519
T+ ++K RDQK+ S N D + P I S +NT KL W V
Sbjct: 114 TAPERMKEERDQKIKSANRDNCLRKPHIYEFSRLTLQNTVMSKRKLTWLV 163
>SB_47342| Best HMM Match : VWA (HMM E-Value=0)
Length = 483
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 356 SPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQET 496
+PI PT + R SP T P+ T+ S + RL+ TP T ++T
Sbjct: 233 APIQPSPTDSQVTRENSPSTTRRPITTIPTS-RPTRLS-TPSTRRKT 277
>SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 214 TTQQNVNRKKHSRTLQKEDVPPLA*LRPKSWPLEAQDPLRHTKLYTQLTN 363
TTQ+ N ++HS T+ K PP P PLE + L+ +LY N
Sbjct: 600 TTQRQGNMRRHSPTMDKHPFPPQM-QHPNLSPLEMR--LQQVQLYQNSPN 646
>SB_6095| Best HMM Match : 7tm_1 (HMM E-Value=0.013)
Length = 872
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = -2
Query: 300 LWSKLSEWGYIFFL*C---ARMLLPVYVLLRCYR 208
LW+K S WGYI L C A +LLP+ V +CY+
Sbjct: 273 LWTKSSSWGYI-ALACKKDACVLLPLAVQGQCYQ 305
>SB_41658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 132 WGESSENCENNCQCSGLITENFRINSGNNATKRKQEEAFSHTTKRRCTPTRLASTKVLAP 311
+G +++N +N Q G T+N N+ + T + TP RLA ++ L+
Sbjct: 224 FGSNTQNIGSNTQNIGSNTQNIGSNTQTSVATLHTSARPPQTLLPQVTPERLALSQRLSC 283
Query: 312 RS--AGSSQTYKTLYSAH 359
R+ G S K SAH
Sbjct: 284 RTMILGHSTQNKNRLSAH 301
>SB_5058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 522 NANWMLRSDLNEFVFWYIAMRFELCNLLCS-NRIINCIT 635
N W L +D E + WYI R E+ +++ S NR+ +T
Sbjct: 286 NGKWGLHNDNRESLKWYIYNRHEIPHIMLSYNRVQRHVT 324
>SB_54687| Best HMM Match : Trp_Tyr_perm (HMM E-Value=2.2)
Length = 369
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 15 SQLSSYHLYWLIIEQFWIAMIMD**F*CFKLELKRCAKMWGESSENC 155
S++ H Y+L++E ++I D C +E+ CA+MWG NC
Sbjct: 178 SKVLQIHTYFLLLE----SVIHDVPMSCLAIEM--CAQMWGIGGINC 218
>SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14)
Length = 441
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 418 KLTSKNHDKLTKIPEINSHSENFTRNTCKLIWYVAM 525
K+ + HD+ +I I SHS++F C I ++A+
Sbjct: 151 KMGDEGHDRYKRILVIVSHSQDFLNGVCTNIIHMAL 186
>SB_441| Best HMM Match : zf-C2H2 (HMM E-Value=5.5)
Length = 336
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 302 PGPSKRRILSDIQNSILSSPINYKPT---SPLIERLKSPETRNSPLKTMTN 445
P S +R+ +++++ + P Y+ +P R+K+P+ N P K + N
Sbjct: 146 PRKSVKRMAQELEDNTIPPPPEYRDRPAPTPRARRIKTPQRVNKPDKALVN 196
>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 407 PETRNSPLKTMTNSPKSQRLT--LTPKTSQETL 499
P +R +P +T TN+P+S+R TPK+ + L
Sbjct: 405 PSSRRNPRETKTNTPRSRRSNSRKTPKSKKSNL 437
>SB_41024| Best HMM Match : DIL (HMM E-Value=1.3e-30)
Length = 1440
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +2
Query: 272 YPHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSP 451
Y S + +SP + R + +N++ SSP++ + T SP SP + SP
Sbjct: 181 YDRSPNNSESPPINTARQIETYRNNVSSSPVSVRSTESEHSNKASPRFAISPSRDSPTSP 240
>SB_56393| Best HMM Match : CTF_NFI (HMM E-Value=0.75)
Length = 886
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 242 SILAHYKKKMYPHSLSFDQSP--GPSKRRIL-SDIQNSILSSPINYKPTSPLIERLKSPE 412
S +A K P S+ FD+S GP + L S + S S P+ K PL++ KSP
Sbjct: 96 STIAKDKDSFLPPSI-FDESESKGPEVAKTLASRVNGSFTSKPLEGK-LKPLMDNYKSPV 153
Query: 413 TRNSPLKTMTNSPKSQ 460
M N+ K++
Sbjct: 154 NCEMFYDDMINAKKNK 169
>SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/39 (28%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 353 SSPINYKPTSPLIERLKSPETR--NSPLKTMTNSPKSQR 463
+ PIN + +P+ ++ +P+T+ N+P+ N+P +Q+
Sbjct: 6 NKPINQQANNPINQQANNPKTQQANNPMTQQANNPINQQ 44
>SB_50158| Best HMM Match : Toxin_16 (HMM E-Value=2)
Length = 746
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 591 LCNLLCSNRIINCITSHLGQ-YYWT*SKICLGSGSTVTTYRQKSTEPL 731
+C++ S++I + H+ Q YYW SK+ LG + + QK + L
Sbjct: 221 VCSVRASHQIHGELEYHIDQDYYWADSKVVLGYINNPSASAQKLQDVL 268
>SB_22476| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 269
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +3
Query: 66 IAMIMD**F*CFKLELKRCAKMWGESSENCENNCQCSGLITENFRINSGNNATKRKQEEA 245
+++ +D + CF++ K CA+ + + C N Q + ++ + N T RK
Sbjct: 3 VSLSLDTVYVCFQVIRKLCAQNTKTTRKPCAQNTQTTR------KLCAQNTQTTRKLCAQ 56
Query: 246 FSHTTKRRCTPTRLASTKVLA 308
+ TT++ C L ++K+ A
Sbjct: 57 NTLTTRKLCAQNTLTTSKLCA 77
>SB_16273| Best HMM Match : SWIM (HMM E-Value=0.02)
Length = 817
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 373 TYFTSDRKIKVTRDQKLTSKNHDKLTKIPEINSHSENFTRNTCKLIWY 516
T D K K TRD+K+ + D + + HS N ++N L+W+
Sbjct: 590 TITKGDGKKKKTRDRKMDIEEEDVIKNRRMLTDHSINISQN---LLWH 634
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 293 DQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSP 409
DQSP P + R+ S ++S SS +P SP+ R SP
Sbjct: 1922 DQSPRPGRSRVNSPSRDSRRSSG-GSRPPSPVKSRSSSP 1959
>SB_56694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 333 SERILRFEGPGLWSKLS-EWGYIFFL*CARMLLPVYVLLRCYRNL 202
S R + F P S+ +GY FF+ A +P+ V++ CY +
Sbjct: 153 SSRAISFAIPSRESRAQFSFGYTFFVATASFFVPLPVMIYCYTRI 197
>SB_54211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 353 SSPINYKPTSPLIERLKSPET-RNSPLKTMTNSPKS 457
SS N KP SP P T RNSP ++ NSP S
Sbjct: 494 SSDTNKKP-SPSQASFSQPSTLRNSPSSSLRNSPSS 528
>SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +2
Query: 302 PGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPK 481
P P+K+R SD+ + + +SP P+I R+ P T+ + T + + +S+ +
Sbjct: 127 PDPAKQRKSSDVSHRLSASP---NSRLPMIRRVSQPATKPT-TGTSSRTDRSRPAPSPAR 182
Query: 482 TSQET 496
+Q T
Sbjct: 183 VNQAT 187
>SB_44656| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 409
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 333 SERILRFEGPGLWSKLS-EWGYIFFL*CARMLLPVYVLLRCYRNL 202
S R + F P S+ +GY FF+ A +P+ V++ CY +
Sbjct: 153 SSRAISFAIPSRESRAQFSFGYTFFVATASFFVPLPVMIYCYTRI 197
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,192,578
Number of Sequences: 59808
Number of extensions: 475899
Number of successful extensions: 1332
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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