Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021920
         (781 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030276-1|AAH30276.1|  529|Homo sapiens LOC220416 protein protein.    31   3.5  
AL139801-5|CAM14704.1|  506|Homo sapiens similar to Leucine-rich...    31   3.5  
AL137141-1|CAI12166.2|  506|Homo sapiens similar to Leucine-rich...    31   3.5  
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun...    30   8.1  
M12140-2|AAA88027.1|  564|Homo sapiens envelope protein protein.       30   8.1  

>BC030276-1|AAH30276.1|  529|Homo sapiens LOC220416 protein protein.
          Length = 529

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +2

Query: 233 TGRSILAHYKKKMYPHSLSFDQSPGPSKRRILSDIQNSILSSP---INYKPTSPLIERLK 403
           T  S++A   +KM+P      +SPG + + I  D+  ++ S P   ++ KP     E  K
Sbjct: 162 TPGSVIAQKLEKMHPKHQPLPESPGYTYQHISRDLSATVPSPPPVTVSMKPEGQWPEHFK 221

Query: 404 SPET 415
           S  T
Sbjct: 222 STAT 225


>AL139801-5|CAM14704.1|  506|Homo sapiens similar to Leucine-rich
           repeat protein SHOC-2 (Ras-binding protein Sur-8)
           protein.
          Length = 506

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +2

Query: 233 TGRSILAHYKKKMYPHSLSFDQSPGPSKRRILSDIQNSILSSP---INYKPTSPLIERLK 403
           T  S++A   +KM+P      +SPG + + I  D+  ++ S P   ++ KP     E  K
Sbjct: 162 TPGSVIAQKLEKMHPKHQPLPESPGYTYQHISRDLSATVPSPPPMTVSMKPEGQWPEHFK 221

Query: 404 SPET 415
           S  T
Sbjct: 222 STAT 225


>AL137141-1|CAI12166.2|  506|Homo sapiens similar to Leucine-rich
           repeat protein SHOC-2 (Ras-binding protein Sur-8)
           protein.
          Length = 506

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +2

Query: 233 TGRSILAHYKKKMYPHSLSFDQSPGPSKRRILSDIQNSILSSP---INYKPTSPLIERLK 403
           T  S++A   +KM+P      +SPG + + I  D+  ++ S P   ++ KP     E  K
Sbjct: 162 TPGSVIAQKLEKMHPKHQPLPESPGYTYQHISRDLSATVPSPPPMTVSMKPEGQWPEHFK 221

Query: 404 SPET 415
           S  T
Sbjct: 222 STAT 225


>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
           protein.
          Length = 1020

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 371 KPTSPLIERLKSPETRNSPLKTMTNSPKSQ 460
           K  SP+ E +KSPE   SPLK    +P+ +
Sbjct: 784 KAKSPVKEEVKSPEKAKSPLKADAKAPEKE 813


>M12140-2|AAA88027.1|  564|Homo sapiens envelope protein protein.
          Length = 564

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = -2

Query: 330 ERILRFEGPGLWSKLSEWGYIFFL*CARMLLPVYVLLRCYRNLS*SFLLLIRNTGNYFRN 151
           ERI+++ GP  W++   WGY   +     ++ +  +L    N +   L L+       RN
Sbjct: 446 ERIIQYYGPATWAEDGMWGYRTPVYMLNRIIRLQAVLEIITNETAGALNLLAQQATKMRN 505

Query: 150 FHY 142
             Y
Sbjct: 506 VIY 508


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,468,678
Number of Sequences: 237096
Number of extensions: 2340709
Number of successful extensions: 5175
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5170
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)