Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021920
         (781 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024212-1|ABC86274.1| 1085|Drosophila melanogaster RE28791p pro...    31   2.4  
AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA ...    31   2.4  
AY051888-1|AAK93312.1|  503|Drosophila melanogaster LD37690p pro...    29   7.2  
AE014297-4320|AAF56856.1|  503|Drosophila melanogaster CG11877-P...    29   7.2  
AE013599-3284|ABC66037.1|  281|Drosophila melanogaster CG34040-P...    29   7.2  
AE013599-762|AAF59007.1|  746|Drosophila melanogaster CG8181-PA ...    29   9.5  

>BT024212-1|ABC86274.1| 1085|Drosophila melanogaster RE28791p protein.
          Length = 1085

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
 Frame = +2

Query: 275  PHSLSFDQSPGPSKRR--ILSDIQNSILS---SPINYKPTSPLIERLKSPETRNSPLKTM 439
            P  L+  +SP PS+RR  +  D +   LS   SP+ +KP SP + R  S     SP +  
Sbjct: 986  PQKLAGPRSPPPSRRRQSLSRDREREHLSRSRSPLPFKPPSPPMRR--SWSKARSPTRRR 1043

Query: 440  TNSPKSQRLTLTPK---TSQETLVN*F 511
            + S +S+  +++P+   +++E   N F
Sbjct: 1044 SFS-RSRSRSISPRSRLSAEEAFANYF 1069


>AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA
            protein.
          Length = 1929

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
 Frame = +2

Query: 275  PHSLSFDQSPGPSKRR--ILSDIQNSILS---SPINYKPTSPLIERLKSPETRNSPLKTM 439
            P  L+  +SP PS+RR  +  D +   LS   SP+ +KP SP + R  S     SP +  
Sbjct: 1354 PQKLAGPRSPPPSRRRQSLSRDREREHLSRSRSPLPFKPPSPPMRR--SWSKARSPTRRR 1411

Query: 440  TNSPKSQRLTLTPK---TSQETLVN*F 511
            + S +S+  +++P+   +++E   N F
Sbjct: 1412 SFS-RSRSRSISPRSRLSAEEAFANYF 1437


>AY051888-1|AAK93312.1|  503|Drosophila melanogaster LD37690p
           protein.
          Length = 503

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +3

Query: 189 ENFRINSGNNATKRKQEEAFSHTTKRRCTPTRLASTKVLAPRSAGSSQTYKTLYSAH 359
           +NFRI+S +   + ++ +   +TTKRR  PT  A+TK L   +    +   T   AH
Sbjct: 15  DNFRISSASTNGEDEESDVAGYTTKRR--PT--AATKELLKDANAKDRNATTGMGAH 67


>AE014297-4320|AAF56856.1|  503|Drosophila melanogaster CG11877-PA
           protein.
          Length = 503

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +3

Query: 189 ENFRINSGNNATKRKQEEAFSHTTKRRCTPTRLASTKVLAPRSAGSSQTYKTLYSAH 359
           +NFRI+S +   + ++ +   +TTKRR  PT  A+TK L   +    +   T   AH
Sbjct: 15  DNFRISSASTNGEDEESDVAGYTTKRR--PT--AATKELLKDANAKDRNATTGMGAH 67


>AE013599-3284|ABC66037.1|  281|Drosophila melanogaster CG34040-PA
           protein.
          Length = 281

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 353 SSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQE 493
           SS     P+S +     S    +S   + TNSP++ + T  P T++E
Sbjct: 202 SSSTESTPSSTMTTESSSSSPESSTTSSTTNSPETTQSTTEPSTTEE 248


>AE013599-762|AAF59007.1|  746|Drosophila melanogaster CG8181-PA
           protein.
          Length = 746

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +2

Query: 308 PSKRRILSDIQNSILSSPIN-YKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKT 484
           P+   +     +S  SSP      T+PL+ + K P T N+P  T T +  +   T TPK 
Sbjct: 396 PTTTTVTKGSSSSSSSSPKPPASSTTPLVTK-KKPTTTNAP-TTTTTTTTTTTTTTTPKP 453

Query: 485 SQET 496
           ++ T
Sbjct: 454 TRRT 457


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,640,771
Number of Sequences: 53049
Number of extensions: 710089
Number of successful extensions: 2042
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2042
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)