Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021919
(726 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 53 3e-07
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 49 3e-06
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 43 3e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_36048| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 39 0.004
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 38 0.011
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 37 0.014
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.014
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.019
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.019
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.033
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.044
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.18
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 33 0.18
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 33 0.24
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 33 0.31
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.41
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 31 0.72
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 31 0.72
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 0.95
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.95
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.3
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 31 1.3
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 2.2
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 2.9
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.8
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_28101| Best HMM Match : DiS_P_DiS (HMM E-Value=6.6) 29 5.1
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 5.1
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 28 6.7
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 28 8.9
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 99.1 bits (236), Expect = 3e-21
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +2
Query: 260 GISAAVSKTAVAPIERIXLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 436
G +A +SKTA APIER+ LL+Q Q + K D YKG++D R + +G LSFWRGN
Sbjct: 17 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGN 76
Query: 437 FANVIRYFPTQALNFAFKDKYK 502
AN IRYFPTQALNFAFKD+ K
Sbjct: 77 LANCIRYFPTQALNFAFKDQVK 98
Score = 35.1 bits (77), Expect = 0.058
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 362 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 508
+YKG +D ++I K++G +S +G AN++R + F DK+K++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKEL 295
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 80.2 bits (189), Expect = 2e-15
Identities = 37/86 (43%), Positives = 61/86 (70%)
Frame = +2
Query: 248 LPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 427
L AGGI+ AVS+T+V+P+ER+ +LLQ+Q + ++KG++ ++I KE+G+L ++
Sbjct: 38 LLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYF 91
Query: 428 RGNFANVIRYFPTQALNFAFKDKYKQ 505
+GN NVIR FP A+ FA ++YK+
Sbjct: 92 KGNGTNVIRIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/84 (41%), Positives = 49/84 (58%)
Frame = +2
Query: 257 GGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 436
GG A VS+TA AP++R+ +LLQVQ A+ GIV F + +E G+ S WRGN
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGN 196
Query: 437 FANVIRYFPTQALNFAFKDKYKQV 508
ANVI+ P + F +K K++
Sbjct: 197 GANVIKIAPESGIKFFAYEKAKKL 220
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/85 (24%), Positives = 45/85 (52%)
Frame = +2
Query: 248 LPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 427
L AG ++ S+T++ P+E + L ++ + Y+G++ A I +++G+ SF+
Sbjct: 234 LLAGSMAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFY 286
Query: 428 RGNFANVIRYFPTQALNFAFKDKYK 502
RG F +++ P ++ A + K
Sbjct: 287 RGLFPSLLGIIPYAGIDLAVYETLK 311
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 260 GISAAVSKTAVAPIERIXLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 430
G +A +SKTA APIER+ LL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 18 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/76 (30%), Positives = 42/76 (55%)
Frame = +2
Query: 257 GGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 436
GG SA ++++ +P+E + +L QV + G++ F + K +G+ +FW+GN
Sbjct: 65 GGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKREGIKAFWKGN 117
Query: 437 FANVIRYFPTQALNFA 484
+ IR FP A+ +A
Sbjct: 118 GVSCIRLFPYSAVQYA 133
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = +2
Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
AG S ++ V P E I L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 158 AGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 214
Query: 434 NFANVIRYFP 463
+ + FP
Sbjct: 215 VTPSFLGLFP 224
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/76 (27%), Positives = 41/76 (53%)
Frame = +2
Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
AG ++ +AP++ + + LQ+Q +K+ + Y+G VD V++ + +GL ++G
Sbjct: 39 AGSVAGLAQVPLIAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQG 97
Query: 434 NFANVIRYFPTQALNF 481
N +R P A+ F
Sbjct: 98 NTVTAVRDIPGFAVYF 113
Score = 37.1 bits (82), Expect = 0.014
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +2
Query: 248 LPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 427
L AGG + VS + P + I +Q + RYKG++D ++ KE+G++ F
Sbjct: 136 LMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCALQSYKEEGMIVFT 191
Query: 428 RGNFANVIRYFPTQALNF 481
RG + ++R F Q L F
Sbjct: 192 RGIWPTLLRGF-LQVLRF 208
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +2
Query: 362 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 505
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_36048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = -3
Query: 709 LEDLADAVSETGEFTLPSPLPTSAARRYV-RSQGGTRSTERWLRRHHRRPDYQRSNARTA 533
L+D+ A+S T + P +PT A R + RS G TR+ R R+H +QR + +T
Sbjct: 150 LQDMTLAISSTPQTLSPVSVPTPATRSVLKRSPGKTRANIRGSPRYHDH-SHQRGSPKTK 208
Query: 532 SSC 524
+SC
Sbjct: 209 TSC 211
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/84 (25%), Positives = 40/84 (47%)
Frame = +2
Query: 263 ISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 442
I A TAV PI+ + +Q Q + A++ YK +D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 443 NVIRYFPTQALNFAFKDKYKQVSS 514
++ P +A+ D + + S
Sbjct: 980 QLLGVSPEKAIKLTTNDFVRGIFS 1003
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 218 PRRSGRVR*GLPAGGISAAVSKTAVAPIERIXLLLQVQ---HVSKQIAADQRYKGIVDAF 388
P + V L G +S +SK + P + I +QVQ + Q+Y G+ D F
Sbjct: 23 PYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCF 82
Query: 389 VRIPKEQGLLSFWRG 433
I KE+G + ++G
Sbjct: 83 RTILKEEGAMGLFKG 97
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2
Query: 257 GGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
G S ++ V P E I L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 428 GTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 347 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 481
I ++Y G+++AF RI +++G+ +F+RG +I P ++F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISF 63
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 245 GLPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL-LS 421
G GG++ AVS+T P++ + +Q ++ + +Y ++ V + K+ G+
Sbjct: 175 GFVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDGIRRG 231
Query: 422 FWRGNFANVIRYFPTQALNFAFKDKYKQ 505
+RG N +R P A+ F + KQ
Sbjct: 232 LYRGLSINYLRVCPQVAIMFGVYEVTKQ 259
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 374 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 508
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/87 (24%), Positives = 37/87 (42%)
Frame = +2
Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
A IS + A P++ +Q + I YKG +D RI + +G+ + W+G
Sbjct: 99 ASMISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKG 155
Query: 434 NFANVIRYFPTQALNFAFKDKYKQVSS 514
R P L F F ++ + ++
Sbjct: 156 FTPYYFRIGPHTVLTFIFLEQLNRAAN 182
Score = 35.1 bits (77), Expect = 0.058
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 365 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 508
Y + +A R+ KE+G+L+ WRG +R A A + KQ+
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQL 82
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
+GGI+ +S P++ + Q + +Y G D +I G+ +F +G
Sbjct: 363 SGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422
Query: 434 NFANVIRYFPTQA 472
A ++R FPT A
Sbjct: 423 LLATILRGFPTNA 435
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 35.9 bits (79), Expect = 0.033
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +2
Query: 248 LPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 427
L AG +S + A P++ + + LQ + K +KG +D F++ + +GL +
Sbjct: 24 LIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLY 82
Query: 428 RGNFANVIRYFPTQALNF 481
+G + ++ P+ AL F
Sbjct: 83 KGMLSPLLMATPSTALTF 100
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.044
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 377 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 502
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 35.5 bits (78), Expect = 0.044
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +2
Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIPKE 406
+ GI+A++++ A PI+ + LQ+Q S +A+ D Y+G++ V + K
Sbjct: 20 SAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKT 79
Query: 407 QGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 502
+G+ + ++G + R ++ D+ K
Sbjct: 80 EGMKTMYKGLIPGIHRQLCFASIRIGLYDQVK 111
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 395 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 508
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 395 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSSG 544
+P+E +L W G ++VI F A+N F+D+YK++ L R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL----LRRMRRSG 184
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 260 GISAAVSKTAVA-PIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
G+S+ V +A+A P + + + Q + + I YK + AF +I K++G L W G
Sbjct: 121 GVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +2
Query: 155 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GLPAGGISAAVSKTAVAPIERIXLLLQV 328
AA + T P+ DH + N E R G V L + ++ V+ +P++ +
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREG-VALHLASALVAGFVATCVASPVDIVRTRFMT 241
Query: 329 QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 454
Q + Y+G +D + + +G+L+ ++G F N R
Sbjct: 242 QPKDTK-GRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +2
Query: 248 LPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 427
L AG ++ + AV P++ I LQ+ + + + Y GI+D +I +GL +F+
Sbjct: 209 LGAGCLAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFY 265
Query: 428 RGNFANVIRYFP 463
+G +I P
Sbjct: 266 KGAVPRMIVIAP 277
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 293 APIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
AP ER+ LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +2
Query: 296 PIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 475
PI+ +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 476 NFAFKDKYKQV 508
F F + K +
Sbjct: 281 FFGFYEFTKNL 291
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 649 PTSAARRYVRSQGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 524
P + R RSQ +R++ RWL R R+P S+ R++S SC
Sbjct: 4 PCNNNRDNTRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +2
Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
+G + V+ + P++ + L VQ +S + ++ Y GIV A RI E+G+ ++G
Sbjct: 34 SGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLYKG 91
Query: 434 NFANVIRYFP 463
+++ P
Sbjct: 92 LVPSLVSIAP 101
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 31.5 bits (68), Expect = 0.72
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +2
Query: 245 GLPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 424
G AGG ++ V +T P++ I L +Q Q + KG + G F
Sbjct: 108 GFLAGGCASIVGQTITVPVDIISQKLMIQ---GQGDRKVKLKGARILIRETFHQHGPGGF 164
Query: 425 WRGNFANVIRYFPTQALNFA 484
++G FA+++ Y P+ A+ +A
Sbjct: 165 YKGYFASLMTYAPSSAIWWA 184
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 31.5 bits (68), Expect = 0.72
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
AGGI+ + P E + LQ+ + AA Y+G +D + K G+L +RG
Sbjct: 46 AGGIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYRG 101
Query: 434 NFANVIRYFPTQALNFA 484
+ + P ++ FA
Sbjct: 102 LSSLLYGSVPKASVRFA 118
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 31.5 bits (68), Expect = 0.72
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 395 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSSGV 547
+P+E L + G ++VI F A+N F+++YK+V A R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 31.1 bits (67), Expect = 0.95
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 278 SKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 436
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 31.1 bits (67), Expect = 0.95
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = +2
Query: 176 YSPSEDHIIEQNVEPRRSGRVR*GLPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAA 355
Y + +++ + + RR V + A GIS ++ + P E L+ Q +
Sbjct: 911 YERLKAELLKLHYKSRRDFHVVECMLAAGISKCIATSLCYPHEVARTRLRQQE--SEFLG 968
Query: 356 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 481
Q+Y+ + +E+G + G +VIR P A+ F
Sbjct: 969 RQKYRSFFQTLGTVLREEGWRGLYGGLGTHVIRQVPNTAIMF 1010
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
AG + A + P++ I + LQ + K YK D F +I + +G+ +RG
Sbjct: 44 AGSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRG 102
Query: 434 NFANVIRYFPTQALNFA 484
++ P + F+
Sbjct: 103 VTVPILNSIPNTTVLFS 119
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 251 PAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 430
P G+S +KT AP+ER+ +L Q Q+ + + A I K++GL +++
Sbjct: 60 PPLGLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWR 430
AG +A + P E I LQ QH + I+ K G++D ++I + G +R
Sbjct: 112 AGSGAAFFMSFVLCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFR 171
Query: 431 GNFANVIRYFP 463
G A R P
Sbjct: 172 GMTATWAREVP 182
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 371 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 508
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 395 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSSG 544
+P+E +L + G ++VI F A+N FK++YK++ T R G
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +2
Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
AG + A+ PIE I LQ+ Y+G++ + KE+G+ +F+R
Sbjct: 3 AGACATVFHDGAMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYRS 54
Query: 434 NFANVIRYFPTQALNF 481
+ P Q L+F
Sbjct: 55 YTTQLSMNIPFQTLHF 70
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 316 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 417
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 316 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 417
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 407 QGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSS 541
Q LLS +A+ I Y+P LN +D +S R+RSS
Sbjct: 412 QFLLSIADSLYADAIHYWPLDQLNITLRDSPLPHASLKTLRKRSS 456
>SB_28101| Best HMM Match : DiS_P_DiS (HMM E-Value=6.6)
Length = 334
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 703 DLADAVSETGEFTLPSPLPTSAARRYVRSQGGTRSTER 590
+L+ + +GE P PLP + R R+QGG R R
Sbjct: 168 ELSSRLGFSGEPPPPPPLPPQSKSRSKRTQGGRRRRRR 205
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 316 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 417
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 316 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 417
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 248 LPAGGISAAVSKTAVAPIERIXLLLQ 325
+ AGG++ S+T AP+E++ ++ Q
Sbjct: 173 MSAGGVAGVASRTLTAPLEKMKIIAQ 198
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,236,919
Number of Sequences: 59808
Number of extensions: 428739
Number of successful extensions: 1582
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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