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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021919
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   169   3e-44
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   169   3e-44
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          22   5.1  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  169 bits (410), Expect = 3e-44
 Identities = 86/159 (54%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
 Frame = +2

Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
           AGG++AA+SKT VAPIER+ LLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRG
Sbjct: 16  AGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75

Query: 434 NFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSSGVTSLVIWXXXXXXXXXLCASC-- 607
           N ANVIRYFPTQALNFAFKDKYKQV    +   +++      +            + C  
Sbjct: 76  NLANVIRYFPTQALNFAFKDKYKQVFLGGVD--KNTQFLRYFVGNLASGGAAGATSLCFV 133

Query: 608 TPLT-SHVPSCRRCR*GRWQREFSGLGNCISKIFKSDGL 721
            PL  +             +REF+GLGNC++KIFK+DG+
Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172



 Score = 47.6 bits (108), Expect = 1e-07
 Identities = 23/38 (60%), Positives = 23/38 (60%)
 Frame = +1

Query: 523 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTVL 636
           DK TQF RYF            TSLCFVYPLDFART L
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRL 143



 Score = 31.9 bits (69), Expect = 0.006
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +3

Query: 210 MSNLADPVAFAKDFL 254
           MS LADPVAFAKDFL
Sbjct: 1   MSGLADPVAFAKDFL 15



 Score = 26.6 bits (56), Expect = 0.24
 Identities = 21/82 (25%), Positives = 35/82 (42%)
 Frame = +2

Query: 248 LPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 427
           L +GG + A S   V P++     L    V K    ++ + G+ +   +I K  G+   +
Sbjct: 119 LASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLY 176

Query: 428 RGNFANVIRYFPTQALNFAFKD 493
           RG   +V      +A  F F D
Sbjct: 177 RGFGVSVQGIIIYRAAYFGFYD 198



 Score = 25.8 bits (54), Expect = 0.42
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 365 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 454
           YK  +  +  I K +G  +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282



 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +3

Query: 630 RLAADVGKGDG 662
           RLAADVGK  G
Sbjct: 142 RLAADVGKAGG 152


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  169 bits (410), Expect = 3e-44
 Identities = 86/159 (54%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
 Frame = +2

Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
           AGG++AA+SKT VAPIER+ LLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRG
Sbjct: 16  AGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75

Query: 434 NFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSSGVTSLVIWXXXXXXXXXLCASC-- 607
           N ANVIRYFPTQALNFAFKDKYKQV    +   +++      +            + C  
Sbjct: 76  NLANVIRYFPTQALNFAFKDKYKQVFLGGVD--KNTQFLRYFVGNLASGGAAGATSLCFV 133

Query: 608 TPLT-SHVPSCRRCR*GRWQREFSGLGNCISKIFKSDGL 721
            PL  +             +REF+GLGNC++KIFK+DG+
Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172



 Score = 47.6 bits (108), Expect = 1e-07
 Identities = 23/38 (60%), Positives = 23/38 (60%)
 Frame = +1

Query: 523 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTVL 636
           DK TQF RYF            TSLCFVYPLDFART L
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRL 143



 Score = 31.9 bits (69), Expect = 0.006
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +3

Query: 210 MSNLADPVAFAKDFL 254
           MS LADPVAFAKDFL
Sbjct: 1   MSGLADPVAFAKDFL 15



 Score = 26.6 bits (56), Expect = 0.24
 Identities = 21/82 (25%), Positives = 35/82 (42%)
 Frame = +2

Query: 248 LPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 427
           L +GG + A S   V P++     L    V K    ++ + G+ +   +I K  G+   +
Sbjct: 119 LASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLY 176

Query: 428 RGNFANVIRYFPTQALNFAFKD 493
           RG   +V      +A  F F D
Sbjct: 177 RGFGVSVQGIIIYRAAYFGFYD 198



 Score = 25.8 bits (54), Expect = 0.42
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 365 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 454
           YK  +  +  I K +G  +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282



 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +3

Query: 630 RLAADVGKGDG 662
           RLAADVGK  G
Sbjct: 142 RLAADVGKAGG 152


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 135 VIPHPRVQQLPPRHIHLVKIT 197
           +I  P  ++LPP H H   +T
Sbjct: 92  IITIPPTRKLPPLHPHTAMVT 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,898
Number of Sequences: 438
Number of extensions: 3818
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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