Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021919
(726 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 169 3e-44
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 169 3e-44
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 22 5.1
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 169 bits (410), Expect = 3e-44
Identities = 86/159 (54%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
Frame = +2
Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
AGG++AA+SKT VAPIER+ LLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRG
Sbjct: 16 AGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75
Query: 434 NFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSSGVTSLVIWXXXXXXXXXLCASC-- 607
N ANVIRYFPTQALNFAFKDKYKQV + +++ + + C
Sbjct: 76 NLANVIRYFPTQALNFAFKDKYKQVFLGGVD--KNTQFLRYFVGNLASGGAAGATSLCFV 133
Query: 608 TPLT-SHVPSCRRCR*GRWQREFSGLGNCISKIFKSDGL 721
PL + +REF+GLGNC++KIFK+DG+
Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172
Score = 47.6 bits (108), Expect = 1e-07
Identities = 23/38 (60%), Positives = 23/38 (60%)
Frame = +1
Query: 523 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTVL 636
DK TQF RYF TSLCFVYPLDFART L
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRL 143
Score = 31.9 bits (69), Expect = 0.006
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 210 MSNLADPVAFAKDFL 254
MS LADPVAFAKDFL
Sbjct: 1 MSGLADPVAFAKDFL 15
Score = 26.6 bits (56), Expect = 0.24
Identities = 21/82 (25%), Positives = 35/82 (42%)
Frame = +2
Query: 248 LPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 427
L +GG + A S V P++ L V K ++ + G+ + +I K G+ +
Sbjct: 119 LASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLY 176
Query: 428 RGNFANVIRYFPTQALNFAFKD 493
RG +V +A F F D
Sbjct: 177 RGFGVSVQGIIIYRAAYFGFYD 198
Score = 25.8 bits (54), Expect = 0.42
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 365 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 454
YK + + I K +G +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 630 RLAADVGKGDG 662
RLAADVGK G
Sbjct: 142 RLAADVGKAGG 152
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 169 bits (410), Expect = 3e-44
Identities = 86/159 (54%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
Frame = +2
Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433
AGG++AA+SKT VAPIER+ LLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRG
Sbjct: 16 AGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75
Query: 434 NFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSSGVTSLVIWXXXXXXXXXLCASC-- 607
N ANVIRYFPTQALNFAFKDKYKQV + +++ + + C
Sbjct: 76 NLANVIRYFPTQALNFAFKDKYKQVFLGGVD--KNTQFLRYFVGNLASGGAAGATSLCFV 133
Query: 608 TPLT-SHVPSCRRCR*GRWQREFSGLGNCISKIFKSDGL 721
PL + +REF+GLGNC++KIFK+DG+
Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172
Score = 47.6 bits (108), Expect = 1e-07
Identities = 23/38 (60%), Positives = 23/38 (60%)
Frame = +1
Query: 523 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTVL 636
DK TQF RYF TSLCFVYPLDFART L
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRL 143
Score = 31.9 bits (69), Expect = 0.006
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 210 MSNLADPVAFAKDFL 254
MS LADPVAFAKDFL
Sbjct: 1 MSGLADPVAFAKDFL 15
Score = 26.6 bits (56), Expect = 0.24
Identities = 21/82 (25%), Positives = 35/82 (42%)
Frame = +2
Query: 248 LPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 427
L +GG + A S V P++ L V K ++ + G+ + +I K G+ +
Sbjct: 119 LASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLY 176
Query: 428 RGNFANVIRYFPTQALNFAFKD 493
RG +V +A F F D
Sbjct: 177 RGFGVSVQGIIIYRAAYFGFYD 198
Score = 25.8 bits (54), Expect = 0.42
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 365 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 454
YK + + I K +G +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 630 RLAADVGKGDG 662
RLAADVGK G
Sbjct: 142 RLAADVGKAGG 152
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 22.2 bits (45), Expect = 5.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 135 VIPHPRVQQLPPRHIHLVKIT 197
+I P ++LPP H H +T
Sbjct: 92 IITIPPTRKLPPLHPHTAMVT 112
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,898
Number of Sequences: 438
Number of extensions: 3818
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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