BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021919 (726 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 169 3e-44 AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 169 3e-44 AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 22 5.1 >AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 169 bits (410), Expect = 3e-44 Identities = 86/159 (54%), Positives = 109/159 (68%), Gaps = 3/159 (1%) Frame = +2 Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433 AGG++AA+SKT VAPIER+ LLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRG Sbjct: 16 AGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75 Query: 434 NFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSSGVTSLVIWXXXXXXXXXLCASC-- 607 N ANVIRYFPTQALNFAFKDKYKQV + +++ + + C Sbjct: 76 NLANVIRYFPTQALNFAFKDKYKQVFLGGVD--KNTQFLRYFVGNLASGGAAGATSLCFV 133 Query: 608 TPLT-SHVPSCRRCR*GRWQREFSGLGNCISKIFKSDGL 721 PL + +REF+GLGNC++KIFK+DG+ Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172 Score = 47.6 bits (108), Expect = 1e-07 Identities = 23/38 (60%), Positives = 23/38 (60%) Frame = +1 Query: 523 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTVL 636 DK TQF RYF TSLCFVYPLDFART L Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRL 143 Score = 31.9 bits (69), Expect = 0.006 Identities = 14/15 (93%), Positives = 14/15 (93%) Frame = +3 Query: 210 MSNLADPVAFAKDFL 254 MS LADPVAFAKDFL Sbjct: 1 MSGLADPVAFAKDFL 15 Score = 26.6 bits (56), Expect = 0.24 Identities = 21/82 (25%), Positives = 35/82 (42%) Frame = +2 Query: 248 LPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 427 L +GG + A S V P++ L V K ++ + G+ + +I K G+ + Sbjct: 119 LASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLY 176 Query: 428 RGNFANVIRYFPTQALNFAFKD 493 RG +V +A F F D Sbjct: 177 RGFGVSVQGIIIYRAAYFGFYD 198 Score = 25.8 bits (54), Expect = 0.42 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +2 Query: 365 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 454 YK + + I K +G +F++G F+N++R Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282 Score = 21.4 bits (43), Expect = 9.0 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = +3 Query: 630 RLAADVGKGDG 662 RLAADVGK G Sbjct: 142 RLAADVGKAGG 152 >AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 169 bits (410), Expect = 3e-44 Identities = 86/159 (54%), Positives = 109/159 (68%), Gaps = 3/159 (1%) Frame = +2 Query: 254 AGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 433 AGG++AA+SKT VAPIER+ LLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRG Sbjct: 16 AGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75 Query: 434 NFANVIRYFPTQALNFAFKDKYKQVSSAALTRRRSSGVTSLVIWXXXXXXXXXLCASC-- 607 N ANVIRYFPTQALNFAFKDKYKQV + +++ + + C Sbjct: 76 NLANVIRYFPTQALNFAFKDKYKQVFLGGVD--KNTQFLRYFVGNLASGGAAGATSLCFV 133 Query: 608 TPLT-SHVPSCRRCR*GRWQREFSGLGNCISKIFKSDGL 721 PL + +REF+GLGNC++KIFK+DG+ Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172 Score = 47.6 bits (108), Expect = 1e-07 Identities = 23/38 (60%), Positives = 23/38 (60%) Frame = +1 Query: 523 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTVL 636 DK TQF RYF TSLCFVYPLDFART L Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRL 143 Score = 31.9 bits (69), Expect = 0.006 Identities = 14/15 (93%), Positives = 14/15 (93%) Frame = +3 Query: 210 MSNLADPVAFAKDFL 254 MS LADPVAFAKDFL Sbjct: 1 MSGLADPVAFAKDFL 15 Score = 26.6 bits (56), Expect = 0.24 Identities = 21/82 (25%), Positives = 35/82 (42%) Frame = +2 Query: 248 LPAGGISAAVSKTAVAPIERIXLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 427 L +GG + A S V P++ L V K ++ + G+ + +I K G+ + Sbjct: 119 LASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLY 176 Query: 428 RGNFANVIRYFPTQALNFAFKD 493 RG +V +A F F D Sbjct: 177 RGFGVSVQGIIIYRAAYFGFYD 198 Score = 25.8 bits (54), Expect = 0.42 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +2 Query: 365 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 454 YK + + I K +G +F++G F+N++R Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282 Score = 21.4 bits (43), Expect = 9.0 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = +3 Query: 630 RLAADVGKGDG 662 RLAADVGK G Sbjct: 142 RLAADVGKAGG 152 >AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. Length = 147 Score = 22.2 bits (45), Expect = 5.1 Identities = 8/21 (38%), Positives = 12/21 (57%) Frame = +3 Query: 135 VIPHPRVQQLPPRHIHLVKIT 197 +I P ++LPP H H +T Sbjct: 92 IITIPPTRKLPPLHPHTAMVT 112 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 186,898 Number of Sequences: 438 Number of extensions: 3818 Number of successful extensions: 20 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 20 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 22535775 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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